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RPB_0024 RPB_0024 purH purH RPB_0107 RPB_0107 folD folD RPB_0134 RPB_0134 RPB_0186 RPB_0186 hisH hisH RPB_0569 RPB_0569 def def dapE dapE RPB_0771 RPB_0771 RPB_0792 RPB_0792 RPB_0842 RPB_0842 RPB_0897 RPB_0897 RPB_0899 RPB_0899 RPB_0936 RPB_0936 RPB_1017 RPB_1017 RPB_1118 RPB_1118 purU purU tadA tadA RPB_1257 RPB_1257 RPB_1331 RPB_1331 glsA glsA RPB_1489 RPB_1489 RPB_1494 RPB_1494 purU-2 purU-2 RPB_1654 RPB_1654 RPB_1671 RPB_1671 ureA ureA ureB ureB ureC ureC RPB_1894 RPB_1894 RPB_1985 RPB_1985 lpxC lpxC RPB_2070 RPB_2070 RPB_2084 RPB_2084 RPB_2162 RPB_2162 folE folE hisI hisI RPB_2340 RPB_2340 RPB_2377 RPB_2377 RPB_2378 RPB_2378 pyrC pyrC RPB_2432 RPB_2432 RPB_2442 RPB_2442 RPB_2500 RPB_2500 RPB_2506 RPB_2506 RPB_2511 RPB_2511 RPB_2636 RPB_2636 RPB_2663 RPB_2663 RPB_2765 RPB_2765 pyrG pyrG RPB_2814 RPB_2814 pxpA pxpA RPB_2921 RPB_2921 RPB_2982 RPB_2982 RPB_2987 RPB_2987 RPB_3008 RPB_3008 RPB_3116 RPB_3116 RPB_3135 RPB_3135 nadE nadE RPB_3462 RPB_3462 RPB_3497 RPB_3497 RPB_3501 RPB_3501 RPB_3511 RPB_3511 RPB_3623 RPB_3623 purQ purQ RPB_3754 RPB_3754 RPB_3790 RPB_3790 RPB_3795 RPB_3795 cheB cheB RPB_4065 RPB_4065 RPB_4082 RPB_4082 RPB_4095 RPB_4095 RPB_4099 RPB_4099 RPB_4141 RPB_4141 RPB_4166 RPB_4166 RPB_4270 RPB_4270 RPB_4390 RPB_4390 RPB_4458 RPB_4458 RPB_4473 RPB_4473 RPB_4501 RPB_4501 RPB_4626 RPB_4626
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB_0024Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. (292 aa)
purHPhosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. (530 aa)
RPB_0107Gly-X carboxypeptidase YSCS precursor. (493 aa)
folDMethenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (295 aa)
RPB_0134Amidohydrolase-like. (547 aa)
RPB_0186Amidohydrolase-like. (625 aa)
hisHImidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (216 aa)
RPB_0569Creatininase. (270 aa)
defPeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (175 aa)
dapESuccinyldiaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (389 aa)
RPB_0771Polysaccharide deacetylase. (352 aa)
RPB_0792dCTP deaminase. (368 aa)
RPB_0842Arginase; Belongs to the arginase family. (328 aa)
RPB_0897Peptidase C14, caspase catalytic subunit p20. (541 aa)
RPB_0899Peptidase C14, caspase catalytic subunit p20. (713 aa)
RPB_0936Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. (557 aa)
RPB_1017Isochorismatase hydrolase. (233 aa)
RPB_1118Dihydroorotase, multifunctional complex type. (444 aa)
purUFormyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (287 aa)
tadAtRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (148 aa)
RPB_1257Formamidase. (409 aa)
RPB_1331Conserved hypothetical protein. (540 aa)
glsAL-glutaminase; Belongs to the glutaminase family. (311 aa)
RPB_1489Acetylornithine deacetylase. (432 aa)
RPB_1494Beta-lactamase. (505 aa)
purU-2Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (305 aa)
RPB_1654Histone deacetylase superfamily. (341 aa)
RPB_1671Enamidase. (398 aa)
ureAUrease, gamma subunit; Belongs to the urease gamma subunit family. (100 aa)
ureBUrease, beta subunit; Belongs to the urease beta subunit family. (101 aa)
ureCUrease. Metallo peptidase. MEROPS family M38; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (570 aa)
RPB_1894Prolyl aminopeptidase. Serine peptidase. MEROPS family S33; Belongs to the peptidase S33 family. (329 aa)
RPB_1985Negative regulator of AmpC, AmpD. (288 aa)
lpxCUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (320 aa)
RPB_2070Hypothetical protein. (338 aa)
RPB_2084Amidohydrolase. (411 aa)
RPB_2162Peptidase C14, caspase catalytic subunit p20. (472 aa)
folEGTP cyclohydrolase. (229 aa)
hisIphosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. (148 aa)
RPB_2340Twin-arginine translocation pathway signal. (272 aa)
RPB_2377Polysaccharide deacetylase. (439 aa)
RPB_2378Polysaccharide deacetylase. (265 aa)
pyrCDihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. (436 aa)
RPB_2432Putative cyclase. (315 aa)
RPB_2442Conserved hypothetical protein. (88 aa)
RPB_2500Polysaccharide deacetylase. (311 aa)
RPB_2506Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. (426 aa)
RPB_2511Sel1-like protein. (287 aa)
RPB_2636Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (389 aa)
RPB_2663Polysaccharide deacetylase. (348 aa)
RPB_2765Sel1-like protein. (273 aa)
pyrGCTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (543 aa)
RPB_2814Twin-arginine translocation pathway signal. (176 aa)
pxpALamB/YcsF; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (254 aa)
RPB_2921Conserved hypothetical protein. (147 aa)
RPB_2982Peptidase C14, caspase catalytic subunit p20. (502 aa)
RPB_2987TfoX-like. (133 aa)
RPB_3008N-acetylmuramoyl-L-alanine amidase. (436 aa)
RPB_3116Isochorismatase hydrolase. (224 aa)
RPB_3135Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. (432 aa)
nadENH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. (585 aa)
RPB_3462Gene transfer agent (GTA) orfg11. (196 aa)
RPB_3497Penicillin V acylase precursor. Cysteine peptidase. MEROPS family C59. (355 aa)
RPB_3501Peptidase C14, caspase catalytic subunit p20. (445 aa)
RPB_3511Polysaccharide deacetylase. (346 aa)
RPB_3623Amidase, hydantoinase/carbamoylase. (415 aa)
purQPhosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...] (233 aa)
RPB_3754Peptidase C14, caspase catalytic subunit p20. (478 aa)
RPB_3790Hypothetical protein. (632 aa)
RPB_3795Conserved hypothetical protein. (113 aa)
cheBResponse regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (388 aa)
RPB_4065Peptidase C26. (267 aa)
RPB_4082Phosphonate metabolism PhnM. (397 aa)
RPB_4095Phosphonate metabolism PhnM. (384 aa)
RPB_4099LmbE-like protein. (246 aa)
RPB_4141Alpha/beta hydrolase protein. (233 aa)
RPB_4166Protein of unknown function DUF152; Belongs to the multicopper oxidase YfiH/RL5 family. (267 aa)
RPB_4270Cytidine deaminase. (141 aa)
RPB_4390Putative cyclase. (236 aa)
RPB_4458Histone deacetylase superfamily. (309 aa)
RPB_4473Sel1-like protein. (366 aa)
RPB_4501Hypothetical protein. (158 aa)
RPB_4626Peptidase C14, caspase catalytic subunit p20. (291 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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