STRINGSTRING
RPB_0529 RPB_0529 RPB_4708 RPB_4708 RPB_4681 RPB_4681 RPB_4613 RPB_4613 RPB_4567 RPB_4567 RPB_4539 RPB_4539 RPB_4403 RPB_4403 RPB_4401 RPB_4401 RPB_4250 RPB_4250 RPB_4239 RPB_4239 RPB_4192 RPB_4192 RPB_4097 RPB_4097 RPB_4021 RPB_4021 RPB_4017 RPB_4017 flgH flgH RPB_3661 RPB_3661 RPB_3638 RPB_3638 RPB_3590 RPB_3590 RPB_3552 RPB_3552 RPB_3527 RPB_3527 RPB_3506 RPB_3506 RPB_3502 RPB_3502 RPB_3452 RPB_3452 RPB_3401 RPB_3401 RPB_3272 RPB_3272 RPB_3149 RPB_3149 RPB_3129 RPB_3129 RPB_3038 RPB_3038 RPB_3036 RPB_3036 RPB_2989 RPB_2989 RPB_2947 RPB_2947 RPB_2887 RPB_2887 bamA-2 bamA-2 RPB_2793 RPB_2793 RPB_2710 RPB_2710 glnD glnD RPB_0041 RPB_0041 RPB_0102 RPB_0102 RPB_0162 RPB_0162 RPB_0301 RPB_0301 RPB_0321 RPB_0321 RPB_0382 RPB_0382 nth nth RPB_0479 RPB_0479 RPB_0502 RPB_0502 RPB_2695 RPB_2695 RPB_2654 RPB_2654 RPB_2646 RPB_2646 RPB_2617 RPB_2617 RPB_2554 RPB_2554 RPB_2543 RPB_2543 lptD lptD RPB_2399 RPB_2399 RPB_2329 RPB_2329 RPB_2241 RPB_2241 RPB_2229 RPB_2229 RPB_2226 RPB_2226 RPB_2224 RPB_2224 RPB_2211 RPB_2211 RPB_2204 RPB_2204 RPB_2173 RPB_2173 RPB_2153 RPB_2153 RPB_2143 RPB_2143 RPB_2088 RPB_2088 bamD bamD pal pal RPB_1762 RPB_1762 mtgA mtgA RPB_1735 RPB_1735 RPB_1699 RPB_1699 RPB_1633 RPB_1633 RPB_1369 RPB_1369 RPB_1309 RPB_1309 RPB_1235 RPB_1235 RPB_1228 RPB_1228 RPB_1206 RPB_1206 RPB_1110 RPB_1110 RPB_0901 RPB_0901 RPB_0900 RPB_0900 RPB_0896 RPB_0896 RPB_0854 RPB_0854 RPB_0772 RPB_0772 bamA bamA RPB_0705 RPB_0705 truA truA RPB_0567 RPB_0567
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB_0529PpiC-type peptidyl-prolyl cis-trans isomerase. (306 aa)
RPB_4708Polysaccharide export protein. (219 aa)
RPB_4681TonB-dependent receptor. (704 aa)
RPB_4613DEAD/DEAH box helicase. (937 aa)
RPB_4567Protein of unknown function UPF0047. (157 aa)
RPB_4539KpsF/GutQ family protein; Belongs to the SIS family. GutQ/KpsF subfamily. (336 aa)
RPB_4403TonB-dependent siderophore receptor. (773 aa)
RPB_4401TonB-dependent receptor. (756 aa)
RPB_4250Conserved hypothetical protein. (290 aa)
RPB_4239TonB-dependent siderophore receptor. (781 aa)
RPB_4192TonB-dependent receptor. (784 aa)
RPB_4097Pyridoxamine 5'-phosphate oxidase-related, FMN-binding. (205 aa)
RPB_4021Conserved hypothetical protein. (162 aa)
RPB_4017Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (340 aa)
flgHFlagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (252 aa)
RPB_3661Haemagluttinin-like protein. (418 aa)
RPB_3638Phenylacetate-CoA oxygenase, PaaJ subunit. (167 aa)
RPB_3590OmpA/MotB. (451 aa)
RPB_3552TonB-dependent receptor. (737 aa)
RPB_3527TonB-dependent siderophore receptor. (761 aa)
RPB_3506Penicillin-binding protein 1A. (769 aa)
RPB_3502TonB-dependent siderophore receptor. (771 aa)
RPB_3452LipA a lipoprotein. (168 aa)
RPB_3401Conserved hypothetical protein. (335 aa)
RPB_3272TonB-dependent siderophore receptor. (750 aa)
RPB_3149TonB-dependent receptor. (785 aa)
RPB_3129Secretin/TonB, short-like protein. (251 aa)
RPB_3038TonB-dependent receptor. (740 aa)
RPB_3036Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (480 aa)
RPB_2989Protein of unknown function DUF59. (122 aa)
RPB_2947Protein of unknown function DUF190. (114 aa)
RPB_2887Cyclase/dehydrase. (157 aa)
bamA-2Surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (845 aa)
RPB_2793Haemagluttinin-like protein. (601 aa)
RPB_2710MazG family protein. (274 aa)
glnDUTP-GlnB (protein PII) uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen fixation and metabolism. (932 aa)
RPB_0041Penicillin-binding protein 1A. (735 aa)
RPB_0102TonB-dependent siderophore receptor. (755 aa)
RPB_0162TonB-dependent iron siderophore receptor. (778 aa)
RPB_0301Protein of unknown function UPF0047. (160 aa)
RPB_0321OmpA/MotB. (651 aa)
RPB_0382Conserved hypothetical protein. (189 aa)
nthEndonuclease III / DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (254 aa)
RPB_0479Secretin/TonB, short-like protein. (260 aa)
RPB_0502Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (483 aa)
RPB_2695TonB-dependent receptor. (711 aa)
RPB_2654TonB-dependent siderophore receptor. (757 aa)
RPB_2646SmpA/OmlA. (158 aa)
RPB_2617Putative transcriptional regulator, TetR family. (207 aa)
RPB_2554TonB-dependent siderophore receptor. (776 aa)
RPB_2543DEAD/DEAH box helicase. (751 aa)
lptDOrganic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. (833 aa)
RPB_2399Lytic transglycosylase, catalytic. (330 aa)
RPB_2329Protein of unknown function UPF0047. (157 aa)
RPB_2241Type I secretion outer membrane protein, TolC. (524 aa)
RPB_2229Lytic transglycosylase, catalytic. (263 aa)
RPB_2226PpiC-type peptidyl-prolyl cis-trans isomerase. (350 aa)
RPB_2224Conserved hypothetical protein. (623 aa)
RPB_2211Hypothetical protein. (237 aa)
RPB_2204Conserved hypothetical protein. (217 aa)
RPB_2173Conserved hypothetical protein. (136 aa)
RPB_2153Putative signal-transduction protein with CBS domains. (142 aa)
RPB_2143Conserved hypothetical protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (495 aa)
RPB_2088TonB-dependent receptor. (793 aa)
bamDPutative lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (301 aa)
palOmpA/MotB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (165 aa)
RPB_1762Response regulator receiver and ANTAR domain protein. (194 aa)
mtgAMonofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (227 aa)
RPB_1735Carbohydrate-selective porin OprB. (449 aa)
RPB_1699Pyridoxamine 5'-phosphate oxidase-related, FMN-binding. (231 aa)
RPB_1633Type I secretion outer membrane protein, TolC. (519 aa)
RPB_1369Conserved hypothetical protein. (547 aa)
RPB_1309Conserved hypothetical protein. (266 aa)
RPB_12352-oxoglutarate ferredoxin oxidoreductase, beta subunit. (270 aa)
RPB_1228Putative signal-transduction protein with CBS domains. (339 aa)
RPB_1206Conserved hypothetical protein. (164 aa)
RPB_1110TonB-dependent siderophore receptor. (768 aa)
RPB_0901Outer membrane autotransporter. (638 aa)
RPB_0900OmpA/MotB. (208 aa)
RPB_0896OmpA/MotB. (212 aa)
RPB_0854Conserved hypothetical protein. (333 aa)
RPB_0772OmpA/MotB. (464 aa)
bamASurface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (840 aa)
RPB_0705MmgE/PrpD. (458 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (245 aa)
RPB_0567OmpA-like transmembrane domain. (661 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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