STRINGSTRING
RPB_0041 RPB_0041 RPB_4695 RPB_4695 RPB_4681 RPB_4681 RPB_4672 RPB_4672 RPB_4521 RPB_4521 RPB_4403 RPB_4403 RPB_4401 RPB_4401 RPB_4362 RPB_4362 RPB_4250 RPB_4250 RPB_4239 RPB_4239 RPB_4203 RPB_4203 RPB_4192 RPB_4192 RPB_4119 RPB_4119 RPB_4028 RPB_4028 RPB_4021 RPB_4021 RPB_3931 RPB_3931 RPB_3590 RPB_3590 RPB_3558 RPB_3558 RPB_3552 RPB_3552 RPB_3527 RPB_3527 RPB_3506 RPB_3506 RPB_3502 RPB_3502 RPB_3452 RPB_3452 RPB_3406 RPB_3406 RPB_3361 RPB_3361 RPB_3272 RPB_3272 RPB_3171 RPB_3171 RPB_3156 RPB_3156 RPB_3149 RPB_3149 RPB_3038 RPB_3038 RPB_3035 RPB_3035 RPB_3012 RPB_3012 RPB_3007 RPB_3007 RPB_2958 RPB_2958 RPB_2894 RPB_2894 bamA-2 bamA-2 RPB_2796 RPB_2796 RPB_2695 RPB_2695 rlpA-2 rlpA-2 RPB_2654 RPB_2654 RPB_2646 RPB_2646 RPB_2554 RPB_2554 RPB_2542 RPB_2542 lptD lptD RPB_2425 RPB_2425 RPB_2399 RPB_2399 RPB_2229 RPB_2229 RPB_2226 RPB_2226 RPB_2224 RPB_2224 RPB_2173 RPB_2173 RPB_2088 RPB_2088 bamD bamD RPB_2000 RPB_2000 RPB_1978 RPB_1978 RPB_1965 RPB_1965 RPB_1924 RPB_1924 RPB_1919 RPB_1919 RPB_1917 RPB_1917 RPB_1841 RPB_1841 pal pal RPB_1478 RPB_1478 RPB_1391 RPB_1391 RPB_1343 RPB_1343 RPB_1297 RPB_1297 RPB_1235 RPB_1235 RPB_1206 RPB_1206 RPB_1167 RPB_1167 RPB_1166 RPB_1166 RPB_1110 RPB_1110 RPB_0900 RPB_0900 RPB_0896 RPB_0896 RPB_0772 RPB_0772 bamA bamA mutM mutM RPB_0529 RPB_0529 mtgA mtgA RPB_0401 RPB_0401 RPB_0325 RPB_0325 RPB_0321 RPB_0321 RPB_0320 RPB_0320 RPB_0287 RPB_0287 rlpA rlpA RPB_0162 RPB_0162 RPB_0102 RPB_0102
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB_0041Penicillin-binding protein 1A. (735 aa)
RPB_4695Propeptide, PepSY amd peptidase M4. (107 aa)
RPB_4681TonB-dependent receptor. (704 aa)
RPB_4672ErfK/YbiS/YcfS/YnhG. (201 aa)
RPB_4521Lytic murein transglycosylase. (464 aa)
RPB_4403TonB-dependent siderophore receptor. (773 aa)
RPB_4401TonB-dependent receptor. (756 aa)
RPB_4362ErfK/YbiS/YcfS/YnhG. (217 aa)
RPB_4250Conserved hypothetical protein. (290 aa)
RPB_4239TonB-dependent siderophore receptor. (781 aa)
RPB_4203Lytic murein transglycosylase. (458 aa)
RPB_4192TonB-dependent receptor. (784 aa)
RPB_4119Lytic murein transglycosylase. (272 aa)
RPB_4028Flavin-containing monooxygenase FMO. (508 aa)
RPB_4021Conserved hypothetical protein. (162 aa)
RPB_3931ErfK/YbiS/YcfS/YnhG. (193 aa)
RPB_3590OmpA/MotB. (451 aa)
RPB_3558Type I secretion outer membrane protein, TolC. (472 aa)
RPB_3552TonB-dependent receptor. (737 aa)
RPB_3527TonB-dependent siderophore receptor. (761 aa)
RPB_3506Penicillin-binding protein 1A. (769 aa)
RPB_3502TonB-dependent siderophore receptor. (771 aa)
RPB_3452LipA a lipoprotein. (168 aa)
RPB_3406Hypothetical protein. (206 aa)
RPB_3361Aminotransferase. (384 aa)
RPB_3272TonB-dependent siderophore receptor. (750 aa)
RPB_3171Flavin-containing monooxygenase FMO. (600 aa)
RPB_3156Conserved hypothetical protein. (442 aa)
RPB_3149TonB-dependent receptor. (785 aa)
RPB_3038TonB-dependent receptor. (740 aa)
RPB_3035Lytic transglycosylase, catalytic. (747 aa)
RPB_3012Aminotransferase. (395 aa)
RPB_3007Penicillin-binding protein 1A. (830 aa)
RPB_2958Lytic murein transglycosylase. (408 aa)
RPB_2894Type I secretion outer membrane protein, TolC. (460 aa)
bamA-2Surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (845 aa)
RPB_2796PpiC-type peptidyl-prolyl cis-trans isomerase. (633 aa)
RPB_2695TonB-dependent receptor. (711 aa)
rlpA-2Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (314 aa)
RPB_2654TonB-dependent siderophore receptor. (757 aa)
RPB_2646SmpA/OmlA. (158 aa)
RPB_2554TonB-dependent siderophore receptor. (776 aa)
RPB_2542Conserved hypothetical protein. (443 aa)
lptDOrganic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. (833 aa)
RPB_2425Phenylpyruvate decarboxylase. (543 aa)
RPB_2399Lytic transglycosylase, catalytic. (330 aa)
RPB_2229Lytic transglycosylase, catalytic. (263 aa)
RPB_2226PpiC-type peptidyl-prolyl cis-trans isomerase. (350 aa)
RPB_2224Conserved hypothetical protein. (623 aa)
RPB_2173Conserved hypothetical protein. (136 aa)
RPB_2088TonB-dependent receptor. (793 aa)
bamDPutative lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (301 aa)
RPB_2000Conserved hypothetical protein. (439 aa)
RPB_1978Extensin-like protein. (402 aa)
RPB_1965ErfK/YbiS/YcfS/YnhG. (233 aa)
RPB_1924Lytic murein transglycosylase. (411 aa)
RPB_1919ABC transporter related. (549 aa)
RPB_1917ErfK/YbiS/YcfS/YnhG. (406 aa)
RPB_1841ErfK/YbiS/YcfS/YnhG. (263 aa)
palOmpA/MotB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (165 aa)
RPB_1478Fumarate reductase/succinate dehydrogenase flavoprotein-like. (591 aa)
RPB_1391ErfK/YbiS/YcfS/YnhG. (252 aa)
RPB_1343Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (161 aa)
RPB_1297Aminotransferase. (400 aa)
RPB_12352-oxoglutarate ferredoxin oxidoreductase, beta subunit. (270 aa)
RPB_1206Conserved hypothetical protein. (164 aa)
RPB_1167ErfK/YbiS/YcfS/YnhG. (224 aa)
RPB_1166Extensin-like protein. (343 aa)
RPB_1110TonB-dependent siderophore receptor. (768 aa)
RPB_0900OmpA/MotB. (208 aa)
RPB_0896OmpA/MotB. (212 aa)
RPB_0772OmpA/MotB. (464 aa)
bamASurface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (840 aa)
mutMDNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (293 aa)
RPB_0529PpiC-type peptidyl-prolyl cis-trans isomerase. (306 aa)
mtgAMonofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (227 aa)
RPB_0401Membrane-bound lytic murein transglycosylase. (506 aa)
RPB_0325Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (607 aa)
RPB_0321OmpA/MotB. (651 aa)
RPB_0320ErfK/YbiS/YcfS/YnhG. (175 aa)
RPB_0287Protein of unknown function UPF0005; Belongs to the BI1 family. (263 aa)
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (160 aa)
RPB_0162TonB-dependent iron siderophore receptor. (778 aa)
RPB_0102TonB-dependent siderophore receptor. (755 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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