STRINGSTRING
RPB_0228 RPB_0228 carB carB RPB_2367 RPB_2367 RPB_2933 RPB_2933 RPB_3020 RPB_3020 RPB_3259 RPB_3259
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB_0228Pyruvate carboxylase. (1102 aa)
carBCarbamoyl-phosphate synthase large subunit; Belongs to the CarB family. (1109 aa)
RPB_2367Carbamoyl-phosphate synthase L chain, ATP-binding. (671 aa)
RPB_2933Carbamoyl-phosphate synthase L chain, ATP-binding. (671 aa)
RPB_3020Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha / biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (451 aa)
RPB_3259Carbamoyl-phosphate synthase L chain, ATP-binding. (659 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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