Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RPB_0135 | RPB_3137 | RPB_0135 | RPB_3137 | Transcriptional regulator, GntR family. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.414 |
| RPB_0450 | metZ | RPB_0450 | RPB_0791 | Methionine gamma-lyase. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.820 |
| RPB_0981 | RPB_2995 | RPB_0981 | RPB_2995 | Nitrogenase cofactor synthesis protein nifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | Cysteine desulfurase. | 0.914 |
| RPB_1001 | RPB_2913 | RPB_1001 | RPB_2913 | O-acetylhomoserine/O-acetylserine sulfhydrylase. | Cystathionine beta-lyase. | 0.937 |
| RPB_1001 | metZ | RPB_1001 | RPB_0791 | O-acetylhomoserine/O-acetylserine sulfhydrylase. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.928 |
| RPB_1155 | RPB_3969 | RPB_1155 | RPB_3969 | Aminotransferase. | 5-aminolevulinate synthase. | 0.804 |
| RPB_1155 | RPB_4563 | RPB_1155 | RPB_4563 | Aminotransferase. | 5-aminolevulinate synthase. | 0.831 |
| RPB_1155 | gcvP | RPB_1155 | RPB_3740 | Aminotransferase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.452 |
| RPB_1184 | RPB_3137 | RPB_1184 | RPB_3137 | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.927 |
| RPB_1184 | RPB_3969 | RPB_1184 | RPB_3969 | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 5-aminolevulinate synthase. | 0.459 |
| RPB_1184 | RPB_4344 | RPB_1184 | RPB_4344 | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 8-amino-7-oxononanoate synthase. | 0.459 |
| RPB_1184 | RPB_4563 | RPB_1184 | RPB_4563 | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 5-aminolevulinate synthase. | 0.459 |
| RPB_1297 | RPB_1966 | RPB_1297 | RPB_1966 | Aminotransferase. | Tryptophanase. | 0.902 |
| RPB_1297 | RPB_2913 | RPB_1297 | RPB_2913 | Aminotransferase. | Cystathionine beta-lyase. | 0.921 |
| RPB_1297 | RPB_4283 | RPB_1297 | RPB_4283 | Aminotransferase. | Pyridoxal-dependent decarboxylase. | 0.912 |
| RPB_1297 | hisC | RPB_1297 | RPB_4254 | Aminotransferase. | Histidinol phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.920 |
| RPB_1314 | gcvP | RPB_1314 | RPB_3740 | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.476 |
| RPB_1314 | glyA | RPB_1314 | RPB_2634 | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.673 |
| RPB_1360 | RPB_2913 | RPB_1360 | RPB_2913 | O-acetylhomoserine/O-acetylserine sulfhydrylase. | Cystathionine beta-lyase. | 0.938 |
| RPB_1360 | metZ | RPB_1360 | RPB_0791 | O-acetylhomoserine/O-acetylserine sulfhydrylase. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.929 |
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