(22 nodes) Branched-chain amino acid ATP-binding cassette transporter, C-terminal network (Rhodopseudomonas palustris HaA2)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPB_0656	ABC transporter related. (314 aa)
	RPB_0144	ABC transporter related. (249 aa)
	RPB_4632	ABC transporter ATPase component; Belongs to the binding-protein-dependent transport system permease family. (590 aa)
	RPB_4426	ABC transporter related. (265 aa)
	RPB_1561	ABC transporter related. (282 aa)
	RPB_1571	ABC transporter related. (249 aa)
	RPB_1582	ABC transporter related. (250 aa)
	RPB_1661	ABC transporter related. (260 aa)
	RPB_1744	ABC transporter related. (265 aa)
	RPB_1797	ABC transporter related. (254 aa)
	RPB_2083	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family. (832 aa)
	RPB_2273	ABC transporter related. (254 aa)
	RPB_2762	ABC transporter related. (256 aa)
	RPB_3167	ABC transporter related. (251 aa)
	RPB_3572	Branched-chain amino acid transport system ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family. (589 aa)
	RPB_3617	ABC transporter related. (244 aa)
	RPB_3683	ABC transporter related. (279 aa)
	RPB_3891	ABC transporter ATPase component; Belongs to the binding-protein-dependent transport system permease family. (954 aa)
	RPB_4205	ABC transporter related. (254 aa)
	RPB_4659	ABC transporter related. (252 aa)
	RPB_1255	ABC transporter related. (251 aa)
	RPB_0694	Inner-membrane translocator, ABC transporter related; Belongs to the binding-protein-dependent transport system permease family. (583 aa)

Your Current Organism:

Rhodopseudomonas palustris HaA2

NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
RPB_0144	RPB_2083	ABC transporter related.	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.680
RPB_0694	RPB_2083	Inner-membrane translocator, ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.944
RPB_0694	RPB_3572	Inner-membrane translocator, ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.	Branched-chain amino acid transport system ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.	0.664
RPB_0694	RPB_3891	Inner-membrane translocator, ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter ATPase component; Belongs to the binding-protein-dependent transport system permease family.	0.671
RPB_0694	RPB_4632	Inner-membrane translocator, ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter ATPase component; Belongs to the binding-protein-dependent transport system permease family.	0.667
RPB_1255	RPB_1797	ABC transporter related.	ABC transporter related.	0.905
RPB_1561	RPB_2083	ABC transporter related.	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.658
RPB_1571	RPB_2083	ABC transporter related.	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.642
RPB_1582	RPB_2083	ABC transporter related.	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.667
RPB_1661	RPB_2083	ABC transporter related.	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.659
RPB_1744	RPB_2083	ABC transporter related.	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.668
RPB_1797	RPB_1255	ABC transporter related.	ABC transporter related.	0.905
RPB_2083	RPB_0144	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter related.	0.680
RPB_2083	RPB_0694	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	Inner-membrane translocator, ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.	0.944
RPB_2083	RPB_1561	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter related.	0.658
RPB_2083	RPB_1571	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter related.	0.642
RPB_2083	RPB_1582	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter related.	0.667
RPB_2083	RPB_1661	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter related.	0.659
RPB_2083	RPB_1744	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter related.	0.668
RPB_2083	RPB_2273	Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter related.	0.665