Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RPB_0300 | RPB_0948 | RPB_0300 | RPB_0948 | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Belongs to the RuBisCO large chain family. | Phosphoribulokinase. | 0.944 |
| RPB_0300 | RPB_3227 | RPB_0300 | RPB_3227 | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Belongs to the RuBisCO large chain family. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit. | 0.710 |
| RPB_0300 | RPB_3963 | RPB_0300 | RPB_3963 | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Belongs to the RuBisCO large chain family. | Ribulose 1,5-bisphosphate carboxylase small subunit. | 0.978 |
| RPB_0300 | cbbL | RPB_0300 | RPB_3964 | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Belongs to the RuBisCO large chain family. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.708 |
| RPB_0300 | cbbM | RPB_0300 | RPB_0951 | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Belongs to the RuBisCO large chain family. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | 0.715 |
| RPB_0300 | pgk | RPB_0300 | RPB_4468 | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Belongs to the RuBisCO large chain family. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.909 |
| RPB_0948 | RPB_0300 | RPB_0948 | RPB_0300 | Phosphoribulokinase. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Belongs to the RuBisCO large chain family. | 0.944 |
| RPB_0948 | RPB_0949 | RPB_0948 | RPB_0949 | Phosphoribulokinase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.786 |
| RPB_0948 | RPB_0950 | RPB_0948 | RPB_0950 | Phosphoribulokinase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.816 |
| RPB_0948 | RPB_3227 | RPB_0948 | RPB_3227 | Phosphoribulokinase. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit. | 0.955 |
| RPB_0948 | RPB_3689 | RPB_0948 | RPB_3689 | Phosphoribulokinase. | Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.950 |
| RPB_0948 | RPB_3963 | RPB_0948 | RPB_3963 | Phosphoribulokinase. | Ribulose 1,5-bisphosphate carboxylase small subunit. | 0.982 |
| RPB_0948 | cbbL | RPB_0948 | RPB_3964 | Phosphoribulokinase. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.984 |
| RPB_0948 | cbbM | RPB_0948 | RPB_0951 | Phosphoribulokinase. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | 0.985 |
| RPB_0948 | fbp | RPB_0948 | RPB_0947 | Phosphoribulokinase. | D-fructose 1,6-bisphosphatase. | 0.918 |
| RPB_0948 | rpiA | RPB_0948 | RPB_3386 | Phosphoribulokinase. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.904 |
| RPB_0949 | RPB_0948 | RPB_0949 | RPB_0948 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Phosphoribulokinase. | 0.786 |
| RPB_0949 | RPB_0950 | RPB_0949 | RPB_0950 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.988 |
| RPB_0949 | RPB_1099 | RPB_0949 | RPB_1099 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Pyruvate phosphate dikinase. | 0.852 |
| RPB_0949 | RPB_1642 | RPB_0949 | RPB_1642 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.960 |
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