STRINGSTRING
RPB_0077 RPB_0077 folD folD RPB_0274 RPB_0274 RPB_0277 RPB_0277 RPB_0278 RPB_0278 sucD sucD sucC sucC mdh mdh RPB_0291 RPB_0291 RPB_0300 RPB_0300 RPB_0306 RPB_0306 RPB_0314 RPB_0314 acsA acsA RPB_0324 RPB_0324 RPB_0325 RPB_0325 RPB_0326 RPB_0326 RPB_0327 RPB_0327 asd asd dapF dapF dapB dapB gpmI gpmI RPB_0444 RPB_0444 pckA pckA RPB_0477 RPB_0477 RPB_0503 RPB_0503 RPB_0508 RPB_0508 RPB_0509 RPB_0509 RPB_0525 RPB_0525 accA accA RPB_0577 RPB_0577 RPB_0616 RPB_0616 accD accD dapE dapE dapD dapD RPB_0691 RPB_0691 RPB_0701 RPB_0701 RPB_0722 RPB_0722 RPB_0724 RPB_0724 RPB_0725 RPB_0725 RPB_0726 RPB_0726 argD argD RPB_0821 RPB_0821 lysA lysA RPB_0830 RPB_0830 RPB_0850 RPB_0850 RPB_0851 RPB_0851 RPB_0871 RPB_0871 RPB_0872 RPB_0872 RPB_0873 RPB_0873 RPB_0874 RPB_0874 RPB_0876 RPB_0876 RPB_0877 RPB_0877 RPB_0878 RPB_0878 RPB_0903 RPB_0903 hmgA hmgA RPB_0908 RPB_0908 RPB_0909 RPB_0909 RPB_0940 RPB_0940 RPB_0946 RPB_0946 fbp fbp RPB_0948 RPB_0948 RPB_0949 RPB_0949 RPB_0950 RPB_0950 cbbM cbbM nifH nifH RPB_0970 RPB_0970 RPB_0971 RPB_0971 RPB_1026 RPB_1026 ackA ackA cysC cysC RPB_1043 RPB_1043 RPB_1044 RPB_1044 RPB_1060 RPB_1060 RPB_1061 RPB_1061 RPB_1076 RPB_1076 RPB_1077 RPB_1077 RPB_1099 RPB_1099 RPB_1136 RPB_1136 RPB_1137 RPB_1137 RPB_1138 RPB_1138 RPB_1141 RPB_1141 RPB_1142 RPB_1142 RPB_1143 RPB_1143 RPB_1144 RPB_1144 RPB_1148 RPB_1148 RPB_1162 RPB_1162 RPB_1186 RPB_1186 RPB_1202 RPB_1202 pdxH pdxH RPB_1234 RPB_1234 RPB_1235 RPB_1235 RPB_1236 RPB_1236 RPB_1237 RPB_1237 RPB_1240 RPB_1240 RPB_1314 RPB_1314 RPB_1315 RPB_1315 thrB thrB glcB glcB RPB_1399 RPB_1399 RPB_1401 RPB_1401 RPB_1405 RPB_1405 RPB_1423 RPB_1423 RPB_1484 RPB_1484 RPB_1491 RPB_1491 RPB_1523 RPB_1523 RPB_1568 RPB_1568 RPB_1576 RPB_1576 RPB_1595 RPB_1595 RPB_1642 RPB_1642 RPB_1647 RPB_1647 RPB_1667 RPB_1667 RPB_1668 RPB_1668 RPB_1669 RPB_1669 RPB_1671 RPB_1671 RPB_1679 RPB_1679 RPB_1682 RPB_1682 RPB_1705 RPB_1705 RPB_1706 RPB_1706 RPB_1707 RPB_1707 RPB_1708 RPB_1708 RPB_1711 RPB_1711 RPB_1746 RPB_1746 RPB_1748 RPB_1748 RPB_1752 RPB_1752 RPB_1753 RPB_1753 RPB_1754 RPB_1754 RPB_1755 RPB_1755 RPB_1765 RPB_1765 ureA ureA ureB ureB ureC ureC RPB_1820 RPB_1820 RPB_1827 RPB_1827 RPB_1828 RPB_1828 RPB_1829 RPB_1829 RPB_1864 RPB_1864 RPB_1871 RPB_1871 RPB_1888 RPB_1888 pgl pgl zwf zwf RPB_1891 RPB_1891 tal tal RPB_1896 RPB_1896 RPB_1903 RPB_1903 RPB_1915 RPB_1915 fumC fumC RPB_2078 RPB_2078 RPB_2085 RPB_2085 RPB_2093 RPB_2093 RPB_2094 RPB_2094 RPB_2101 RPB_2101 RPB_2107 RPB_2107 RPB_2121 RPB_2121 RPB_2123 RPB_2123 RPB_2131 RPB_2131 RPB_2135 RPB_2135 RPB_2257 RPB_2257 RPB_2269 RPB_2269 RPB_2342 RPB_2342 RPB_2350 RPB_2350 RPB_2353 RPB_2353 RPB_2367 RPB_2367 RPB_2369 RPB_2369 RPB_2474 RPB_2474 RPB_2497 RPB_2497 RPB_2522 RPB_2522 RPB_2551 RPB_2551 RPB_2558 RPB_2558 RPB_2590 RPB_2590 dapA dapA RPB_2623 RPB_2623 glyA glyA RPB_2704 RPB_2704 RPB_2705 RPB_2705 RPB_2766 RPB_2766 RPB_2768 RPB_2768 RPB_2770 RPB_2770 pdhA pdhA eno eno tpiA tpiA RPB_2805 RPB_2805 gltX gltX RPB_2813 RPB_2813 RPB_2907 RPB_2907 RPB_2963 RPB_2963 RPB_2965 RPB_2965 RPB_2966 RPB_2966 RPB_3019 RPB_3019 RPB_3020 RPB_3020 RPB_3087 RPB_3087 RPB_3105 RPB_3105 RPB_3136 RPB_3136 RPB_3137 RPB_3137 nosZ nosZ RPB_3169 RPB_3169 RPB_3186 RPB_3186 RPB_3227 RPB_3227 RPB_3249 RPB_3249 RPB_3251 RPB_3251 RPB_3255 RPB_3255 RPB_3300 RPB_3300 RPB_3347 RPB_3347 rpiA rpiA RPB_3418 RPB_3418 RPB_3536 RPB_3536 RPB_3538 RPB_3538 RPB_3557 RPB_3557 RPB_3567 RPB_3567 RPB_3583 RPB_3583 ppc ppc RPB_3605 RPB_3605 RPB_3607 RPB_3607 RPB_3629 RPB_3629 RPB_3634 RPB_3634 RPB_3636 RPB_3636 RPB_3637 RPB_3637 RPB_3638 RPB_3638 RPB_3639 RPB_3639 RPB_3640 RPB_3640 RPB_3641 RPB_3641 RPB_3645 RPB_3645 RPB_3656 RPB_3656 RPB_3689 RPB_3689 RPB_3700 RPB_3700 RPB_3732 RPB_3732 RPB_3762 RPB_3762 RPB_3806 RPB_3806 RPB_3807 RPB_3807 RPB_3808 RPB_3808 RPB_3858 RPB_3858 RPB_3868 RPB_3868 cysQ cysQ RPB_3937 RPB_3937 RPB_3938 RPB_3938 RPB_3958 RPB_3958 RPB_3963 RPB_3963 cbbL cbbL RPB_4018 RPB_4018 RPB_4023 RPB_4023 RPB_4039 RPB_4039 RPB_4054 RPB_4054 RPB_4057 RPB_4057 RPB_4151 RPB_4151 RPB_4163 RPB_4163 prs prs RPB_4199 RPB_4199 RPB_4210 RPB_4210 RPB_4226 RPB_4226 RPB_4363 RPB_4363 RPB_4364 RPB_4364 RPB_4367 RPB_4367 RPB_4368 RPB_4368 RPB_4369 RPB_4369 RPB_4370 RPB_4370 RPB_4371 RPB_4371 RPB_4372 RPB_4372 RPB_4373 RPB_4373 RPB_4407 RPB_4407 RPB_4408 RPB_4408 RPB_4412 RPB_4412 RPB_4420 RPB_4420 RPB_4422 RPB_4422 RPB_4423 RPB_4423 RPB_4431 RPB_4431 RPB_4433 RPB_4433 RPB_4466 RPB_4466 RPB_4467 RPB_4467 pgk pgk RPB_4471 RPB_4471 ubiX ubiX RPB_4511 RPB_4511 RPB_4512 RPB_4512 RPB_4513 RPB_4513 dapA-2 dapA-2 RPB_4530 RPB_4530 RPB_4531 RPB_4531 RPB_4578 RPB_4578 RPB_4604 RPB_4604 RPB_4605 RPB_4605 RPB_4629 RPB_4629 RPB_4656 RPB_4656 RPB_4676 RPB_4676 RPB_4677 RPB_4677 RPB_4699 RPB_4699
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
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gene neighborhood
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RPB_0077Aspartate kinase; Belongs to the aspartokinase family. (417 aa)
folDMethenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (295 aa)
RPB_0274Dihydrolipoamide dehydrogenase. (467 aa)
RPB_02772-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (411 aa)
RPB_02782-oxoglutarate dehydrogenase E1 component. (985 aa)
sucDsuccinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (294 aa)
sucCsuccinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (398 aa)
mdhMalate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (322 aa)
RPB_0291Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (920 aa)
RPB_0300Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Belongs to the RuBisCO large chain family. (431 aa)
RPB_0306Rhodanese-like. (293 aa)
RPB_0314Uroporphyrinogen III synthase HEM4; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (265 aa)
acsAAcetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (652 aa)
RPB_0324Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (269 aa)
RPB_0325Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (607 aa)
RPB_0326Succinate dehydrogenase subunit D. (140 aa)
RPB_0327Succinate dehydrogenase subunit C. (132 aa)
asdAspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (344 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (293 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. (271 aa)
gpmIPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (504 aa)
RPB_04446-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. (312 aa)
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (537 aa)
RPB_0477Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (332 aa)
RPB_0503Acetyl-CoA hydrolase. (548 aa)
RPB_05083-oxoacyl-[acyl-carrier-protein] reductase. (241 aa)
RPB_0509acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
RPB_0525Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
accAAcetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (320 aa)
RPB_0577Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (497 aa)
RPB_0616Glycolate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (333 aa)
accDAcetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA. (322 aa)
dapESuccinyldiaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (389 aa)
dapD2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. (310 aa)
RPB_0691Amidase. (505 aa)
RPB_0701Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
RPB_0722Formate dehydrogenase delta subunit. (72 aa)
RPB_0724Formate dehydrogenase, alpha subunit. (948 aa)
RPB_0725NADH dehydrogenase (quinone). (518 aa)
RPB_0726NADH dehydrogenase (ubiquinone), 24 kDa subunit. (156 aa)
argDAcetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (407 aa)
RPB_08213-hydroxyacyl-CoA dehydrogenase. (293 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (421 aa)
RPB_08304-carboxymuconolactone decarboxylase. (126 aa)
RPB_0850Glutamate synthase (NADPH) small chain; Sulfide dehydrogenase (flavoprotein) subunit SudA / sulfide dehydrogenase (flavoprotein) subunit SudB. (942 aa)
RPB_0851Pyruvate flavodoxin/ferredoxin oxidoreductase. (1652 aa)
RPB_0871Oxidoreductase-like. (319 aa)
RPB_0872Protocatechuate 4,5-dioxygenase. (284 aa)
RPB_0873Protocatechuate 4,5-dioxygenase. (129 aa)
RPB_0874Amidohydrolase 2. (304 aa)
RPB_0876Dimethylmenaquinone methyltransferase. (231 aa)
RPB_0877Amidohydrolase 2. (342 aa)
RPB_0878Methylitaconate delta2-delta3-isomerase. (372 aa)
RPB_09033-(3-hydroxy-phenyl)propionate hydroxylase. (540 aa)
hmgAHomogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. (448 aa)
RPB_0908Maleylacetoacetate isomerase. (218 aa)
RPB_0909Fumarylacetoacetate hydrolase. (422 aa)
RPB_0940Amidase; Belongs to the amidase family. (504 aa)
RPB_0946Iron-containing alcohol dehydrogenase. (395 aa)
fbpD-fructose 1,6-bisphosphatase. (343 aa)
RPB_0948Phosphoribulokinase. (291 aa)
RPB_0949Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (671 aa)
RPB_0950Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (361 aa)
cbbMRibulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. (461 aa)
nifHNitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. (299 aa)
RPB_0970Nitrogenase molybdenum-iron protein alpha chain. (487 aa)
RPB_0971Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. (519 aa)
RPB_1026Phosphate butyryltransferase. (472 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (400 aa)
cysCAdenylylsulfate kinase / sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. (642 aa)
RPB_1043Sulfate adenylyltransferase subunit 2. (291 aa)
RPB_1044Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. (244 aa)
RPB_1060Extradiol ring-cleavage dioxygenase LigAB, LigA subunit. (127 aa)
RPB_1061Protocatechuate 4,5-dioxygenase. (285 aa)
RPB_1076Coenzyme A transferase. (272 aa)
RPB_1077CoA transferase, subunit B. (250 aa)
RPB_1099Pyruvate phosphate dikinase. (1004 aa)
RPB_1136Ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family. (441 aa)
RPB_1137Glutamate synthase (NADPH) GltB3 subunit. (229 aa)
RPB_1138Glutamate synthase (NADPH) GltB1 subunit. (298 aa)
RPB_1141Sarcosine oxidase, beta subunit family. (416 aa)
RPB_1142Sarcosine oxidase, delta subunit, heterotetrameric. (91 aa)
RPB_1143Sarcosine oxidase, alpha subunit family. (987 aa)
RPB_1144Sarcosine oxidase, gamma subunit. (193 aa)
RPB_1148Alcohol dehydrogenase superfamily, zinc-containing. (339 aa)
RPB_1162Acyl-CoA dehydrogenase-like. (404 aa)
RPB_11864-oxalocrotonate tautomerase. (67 aa)
RPB_1202Carboxymethylenebutenolidase. (224 aa)
pdxHPyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). (212 aa)
RPB_12342-oxoglutarate ferredoxin oxidoreductase, alpha subunit. (386 aa)
RPB_12352-oxoglutarate ferredoxin oxidoreductase, beta subunit. (270 aa)
RPB_1236Pyruvate ferredoxin/flavodoxin oxidoreductase. (185 aa)
RPB_1237phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (444 aa)
RPB_1240Enoyl-CoA hydratase. (282 aa)
RPB_1314Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (390 aa)
RPB_1315D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (529 aa)
thrBHomoserine kinase; Belongs to the pseudomonas-type ThrB family. (326 aa)
glcBMalate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (724 aa)
RPB_1399uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. (478 aa)
RPB_1401Sulfite reductase, hemoprotein subunit. (550 aa)
RPB_1405L-glutamine synthetase. (367 aa)
RPB_1423Pyruvate kinase; Belongs to the pyruvate kinase family. (477 aa)
RPB_1484Amidase. (460 aa)
RPB_1491Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (463 aa)
RPB_1523Phosphomannomutase C. (498 aa)
RPB_1568Carboxymuconolactone decarboxylase. (109 aa)
RPB_1576Uroporphyrinogen III synthase HEM4. (281 aa)
RPB_1595Fumarylacetoacetate (FAA) hydrolase. (233 aa)
RPB_1642Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (347 aa)
RPB_1647D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding. (311 aa)
RPB_16676-hydroxynicotinate reductase. (498 aa)
RPB_1668(2Fe-2S)-binding protein. (196 aa)
RPB_1669Pyrroloquinoline-quinone aldehyde dehydrogenase. (1183 aa)
RPB_1671Enamidase. (398 aa)
RPB_1679Amidase; Belongs to the amidase family. (500 aa)
RPB_1682Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
RPB_17053,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD. (325 aa)
RPB_17065-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (519 aa)
RPB_17075-carboxymethyl-2-hydroxymuconate isomerase. (132 aa)
RPB_17082-oxo-hepta-3-ene-1,7-dioic acid hydratase. (268 aa)
RPB_1711HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (258 aa)
RPB_1746Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. (699 aa)
RPB_1748Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
RPB_1752Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (897 aa)
RPB_1753Sulfite reductase (NADPH) alpha subunit. (539 aa)
RPB_1754Precorrin-3B synthase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (586 aa)
RPB_1755Assimilatory nitrate reductase (NADH) beta subunit. (410 aa)
RPB_17655,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (295 aa)
ureAUrease, gamma subunit; Belongs to the urease gamma subunit family. (100 aa)
ureBUrease, beta subunit; Belongs to the urease beta subunit family. (101 aa)
ureCUrease. Metallo peptidase. MEROPS family M38; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (570 aa)
RPB_1820Amidase; Belongs to the amidase family. (483 aa)
RPB_1827FAD linked oxidase-like. (497 aa)
RPB_1828FAD linked oxidase-like. (416 aa)
RPB_1829Conserved hypothetical protein. (437 aa)
RPB_1864Alpha/beta hydrolase. (301 aa)
RPB_1871Alcohol dehydrogenase superfamily, zinc-containing. (350 aa)
RPB_1888Gluconate kinase. (178 aa)
pgl6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (248 aa)
zwfGlucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (504 aa)
RPB_18916-phosphogluconate dehydrogenase (decarboxylating). (345 aa)
talTransaldolase / glucose-6-phosphate isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family. (950 aa)
RPB_1896Amidase; Belongs to the amidase family. (465 aa)
RPB_1903Gluconolactonase. (309 aa)
RPB_19153-mercaptopyruvate sulfurtransferase. (285 aa)
fumCFumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (472 aa)
RPB_2078Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (428 aa)
RPB_2085Amidase; Belongs to the amidase family. (399 aa)
RPB_20933-oxoacyl-acyl carrier protein reductase. (249 aa)
RPB_2094Short-chain dehydrogenase/reductase. (244 aa)
RPB_2101Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (389 aa)
RPB_2107CoA-binding. (702 aa)
RPB_2121Enoyl-CoA hydratase/isomerase. (357 aa)
RPB_2123AMP-dependent synthetase and ligase. (572 aa)
RPB_2131Salicylate 1-monooxygenase. (400 aa)
RPB_2135Serine O-acetyltransferase. (302 aa)
RPB_2257D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding. (336 aa)
RPB_2269L-glutamine synthetase. (476 aa)
RPB_2342Carboxyl transferase. (510 aa)
RPB_2350Thiolase. (382 aa)
RPB_2353Dihydrodipicolinate synthetase; Belongs to the DapA family. (317 aa)
RPB_2367Carbamoyl-phosphate synthase L chain, ATP-binding. (671 aa)
RPB_2369Acylphosphatase. (99 aa)
RPB_2474Alcohol dehydrogenase, zinc-containing. (352 aa)
RPB_2497Bifunctional oxaloacetate decarboxylating malate dehydrogenase (NADP+)/phosphate acetyltransferase. (769 aa)
RPB_25225-carboxymethyl-2-hydroxymuconate delta isomerase. (115 aa)
RPB_2551Amidase; Belongs to the amidase family. (474 aa)
RPB_2558L-glutamine synthetase. (469 aa)
RPB_2590methylmalonyl-CoA epimerase. (134 aa)
dapADihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (296 aa)
RPB_2623Porphobilinogen synthase; Belongs to the ALAD family. (350 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (433 aa)
RPB_2704Nitrile hydratase, alpha subunit. (216 aa)
RPB_2705Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family. (219 aa)
RPB_2766Dihydrolipoamide dehydrogenase. (473 aa)
RPB_2768Dihydrolipoamide acetyltransferase, long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (451 aa)
RPB_2770Transketolase-like; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (467 aa)
pdhAPyruvate dehydrogenase alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (344 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (427 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (261 aa)
RPB_2805HAD-superfamily hydrolase subfamily IA, variant 1. (208 aa)
gltXglutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (473 aa)
RPB_2813Citrate synthase; Belongs to the citrate synthase family. (434 aa)
RPB_2907Pyridoxal-5'-phosphate-dependent enzyme, beta subunit. (346 aa)
RPB_2963Haloacid dehalogenase, type II. (241 aa)
RPB_2965Fructose-1,6-bisphosphatase, class II. (334 aa)
RPB_2966Homoserine dehydrogenase. (440 aa)
RPB_3019Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (170 aa)
RPB_3020Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha / biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (451 aa)
RPB_3087Pyridoxal-5'-phosphate-dependent enzyme, beta subunit. (405 aa)
RPB_3105Amidohydrolase 2. (317 aa)
RPB_3136Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (483 aa)
RPB_31374-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (424 aa)
nosZTwin-arginine translocation pathway signal; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family. (648 aa)
RPB_3169Pyruvate kinase; Belongs to the pyruvate kinase family. (492 aa)
RPB_3186uroporphyrinogen-III C-methyltransferase. (249 aa)
RPB_3227Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit. (367 aa)
RPB_3249Aldehyde dehydrogenase. (476 aa)
RPB_3251Pyruvate dehydrogenase alpha subunit; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (798 aa)
RPB_3255Intradiol ring-cleavage dioxygenase. (301 aa)
RPB_3300Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; Beta subunit of the biotin-dependent malonate decarboxylase multienzyme complex (EC 7.2.4.4). Acts as an integral membrane-bound carboxybiotin protein decarboxylase by releasing the carboxyl group of the carboxylated biotin carrier MADF. The free energy of the decarboxylation reaction is used to pump Na(+) out of the cell. (404 aa)
RPB_3347Phosphoserine phosphatase. (297 aa)
rpiARibose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (232 aa)
RPB_3418Alcohol dehydrogenase superfamily, zinc-containing; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (369 aa)
RPB_3536Methylmalonyl-CoA mutase. (623 aa)
RPB_3538methylmalonyl-CoA mutase. (736 aa)
RPB_3557Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
RPB_3567Hydroxypyruvate reductase. (426 aa)
RPB_35834-hydroxybenzoate 3-monooxygenase. (389 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (933 aa)
RPB_3605Enoyl-CoA hydratase. (266 aa)
RPB_3607acetyl-CoA acetyltransferase. (503 aa)
RPB_3629Amidase. (477 aa)
RPB_3634phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (444 aa)
RPB_3636Phenylacetic acid degradation protein paaN. (678 aa)
RPB_3637Phenylacetate-CoA oxygenase/reductase, PaaK subunit. (365 aa)
RPB_3638Phenylacetate-CoA oxygenase, PaaJ subunit. (167 aa)
RPB_3639Phenylacetate-CoA oxygenase, PaaI subunit. (258 aa)
RPB_3640Phenylacetic acid degradation B. (95 aa)
RPB_3641Phenylacetate-CoA oxygenase, PaaG subunit. (355 aa)
RPB_3645FAD-binding oxidoreductase. (1072 aa)
RPB_3656FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (405 aa)
RPB_3689Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (232 aa)
RPB_3700Aromatic amino acid beta-eliminating lyase/threonine aldolase. (355 aa)
RPB_3732Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family. (408 aa)
RPB_3762Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (555 aa)
RPB_3806Alcohol dehydrogenase superfamily, zinc-containing. (351 aa)
RPB_3807Acetoin dehydrogenase (TPP-dependent) beta chain. (350 aa)
RPB_3808Acetoin dehydrogenase (TPP-dependent) alpha chain. (323 aa)
RPB_3858Fructose-6-phosphate phosphoketolase. (784 aa)
RPB_38683,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD_Fe. (283 aa)
cysQInositol monophosphatase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. (278 aa)
RPB_3937Conserved hypothetical protein. (285 aa)
RPB_3938Benzoylformate decarboxylase; Belongs to the TPP enzyme family. (540 aa)
RPB_3958Dihydrodipicolinate synthetase; Belongs to the DapA family. (291 aa)
RPB_3963Ribulose 1,5-bisphosphate carboxylase small subunit. (140 aa)
cbbLRibulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. (485 aa)
RPB_4018Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (326 aa)
RPB_4023Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like. (410 aa)
RPB_4039Phosphoglucomutase, alpha-D-glucose phosphate-specific. (550 aa)
RPB_4054Amidase. (467 aa)
RPB_4057Amidase. (599 aa)
RPB_4151Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (417 aa)
RPB_4163Dienelactone hydrolase. (246 aa)
prsRibose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (317 aa)
RPB_4199Isocitrate lyase. (545 aa)
RPB_4210NADH:flavin oxidoreductase/NADH oxidase. (372 aa)
RPB_4226D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding. (331 aa)
RPB_4363Twin-arginine translocation pathway signal. (423 aa)
RPB_4364Sulfide dehydrogenase (flavoprotein). (420 aa)
RPB_4367Sulfur dehydrogenase subunit SoxD. (243 aa)
RPB_4368Sulfur dehydrogenase subunit SoxC. (425 aa)
RPB_4369Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family. (578 aa)
RPB_4370Sulfur compound chelating protein SoxZ. (109 aa)
RPB_4371Thiosulfate-binding protein SoxY. (154 aa)
RPB_4372Conserved hypothetical protein. (272 aa)
RPB_4373Conserved hypothetical protein. (245 aa)
RPB_4407LPPG:FO 2-phospho-L-lactate transferase. (329 aa)
RPB_4408Coenzyme F420-0 gamma-glutamyl ligase. (252 aa)
RPB_4412Luciferase-like. (317 aa)
RPB_4420L-threonine synthase. (420 aa)
RPB_4422Protein of unknown function DUF121. (199 aa)
RPB_4423FO synthase subunit 2 / FO synthase subunit 1. (820 aa)
RPB_4431Methylenetetrahydromethanopterin reductase. (321 aa)
RPB_4433L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. (353 aa)
RPB_4466Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (662 aa)
RPB_4467Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (335 aa)
pgkPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (398 aa)
RPB_4471Fructose-bisphosphate aldolase. (346 aa)
ubiX3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (200 aa)
RPB_4511Xanthine dehydrogenase, molybdenum binding subunit apoprotein. (747 aa)
RPB_4512Molybdopterin dehydrogenase, FAD-binding. (328 aa)
RPB_4513(2Fe-2S)-binding protein. (178 aa)
dapA-2Dihydrodipicolinate synthetase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (303 aa)
RPB_4530Glutamate synthase (NADH) small subunit. (484 aa)
RPB_4531Glutamate synthase (NADH) large subunit. (1579 aa)
RPB_4578L-threonine synthase. (472 aa)
RPB_46043-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (738 aa)
RPB_4605Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
RPB_4629Serine--glyoxylate transaminase. (395 aa)
RPB_4656benzoate-CoA ligase. (517 aa)
RPB_4676Carboxymuconolactone decarboxylase. (181 aa)
RPB_4677Glyoxalase/bleomycin resistance protein/dioxygenase. (167 aa)
RPB_4699Iron-containing alcohol dehydrogenase. (380 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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