STRINGSTRING
fliJ fliJ Geob_3447 Geob_3447 rarA rarA rodA rodA Geob_3493 Geob_3493 dsbD dsbD Geob_3537 Geob_3537 zapA zapA zapB zapB smc smc glmU glmU mfd mfd Geob_3713 Geob_3713 Geob_3744 Geob_3744 Geob_3805 Geob_3805 Geob_3806 Geob_3806 hup-1 hup-1 prfC prfC yidD yidD lptD lptD murJ murJ yceG yceG Geob_1938 Geob_1938 rep rep nifS-2 nifS-2 Geob_2046 Geob_2046 yaeT yaeT Geob_2098 Geob_2098 Geob_2139 Geob_2139 lptE lptE Geob_2184 Geob_2184 Geob_2186 Geob_2186 Geob_2190 Geob_2190 Geob_2191 Geob_2191 lptA lptA ruvB ruvB ruvA ruvA Geob_2381 Geob_2381 bbsG bbsG Geob_2461 Geob_2461 Geob_2466 Geob_2466 Geob_2467 Geob_2467 Geob_2491 Geob_2491 Geob_2500 Geob_2500 Geob_2501 Geob_2501 nifS-3 nifS-3 Geob_2514 Geob_2514 nifS-4 nifS-4 Geob_2539 Geob_2539 Geob_2540 Geob_2540 nifEN nifEN recG recG pulO pulO oxpG oxpG pilT-2 pilT-2 priA priA rhlE-1 rhlE-1 Geob_1301 Geob_1301 Geob_1200 Geob_1200 Geob_1199 Geob_1199 pilT-1 pilT-1 Geob_1089 Geob_1089 lytS lytS rlpA rlpA ftsZ ftsZ ftsQ ftsQ ddl ddl murB murB murC murC murG murG ftsW ftsW murD murD mraY mraY murF murF murE murE yfiO yfiO typA typA Geob_0744 Geob_0744 murA murA prfA prfA Geob_0679 Geob_0679 flaF flaF flbT flbT flgK flgK flgM flgM flgJ flgJ flgA flgA flhG flhG flhF flhF flhA flhA Geob_0622 Geob_0622 rsfS rsfS uppP uppP engB engB fliR fliR fliQ fliQ fliP fliP fliO fliO flgD flgD fliK fliK Geob_0499 Geob_0499 cas5d cas5d pilT-3 pilT-3 recQ recQ pcrA pcrA Geob_0369 Geob_0369 Geob_0323 Geob_0323 Geob_0237 Geob_0237 fadE fadE Geob_0057 Geob_0057 Geob_0056 Geob_0056 gyrA gyrA gyrB gyrB ccdA-2 ccdA-2 Geob_2747 Geob_2747 Geob_2773 Geob_2773 Geob_2838 Geob_2838 Geob_2913 Geob_2913 Geob_3022 Geob_3022 nifS-1 nifS-1 nifU nifU pilP pilP pilO pilO pilN pilN pilW pilW prfB prfB Geob_3135 Geob_3135 Geob_3174 Geob_3174 Geob_3184 Geob_3184 yhbY yhbY rhlE-2 rhlE-2 Geob_3316 Geob_3316 Geob_3320 Geob_3320 Geob_3344 Geob_3344 Geob_3345 Geob_3345 Geob_3354 Geob_3354 Geob_3357 Geob_3357 rplT rplT pilA pilA pilT-4 pilT-4 cas2 cas2 cas1 cas1 csd2 csd2 murI murI recD recD recB recB recC recC Geob_1427 Geob_1427 Geob_1428 Geob_1428 Geob_1488 Geob_1488 frr frr ccdA-1 ccdA-1 topA topA fdnG-1 fdnG-1 fdnG-2 fdnG-2 Geob_1691 Geob_1691 dnaB dnaB Geob_1754 Geob_1754 rhlB rhlB Geob_1790 Geob_1790 Geob_1859 Geob_1859
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fliJFlagellar export protein FliJ. (148 aa)
Geob_3447TPR domain protein. (187 aa)
rarAStalled replication fork rescue ATPase. (438 aa)
rodAPeptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. (366 aa)
Geob_3493LemA family lipoprotein. (191 aa)
dsbDThiol:disulfide interchange protein. (228 aa)
Geob_3537TPR domain lipoprotein. (248 aa)
zapACell division protein ZapA. (92 aa)
zapBCell division protein ZapB. (61 aa)
smcChromosome segregation ATPase SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1176 aa)
glmUGlucosamine-1-phosphate N-acetyltransferase and N-acetylglucosamine-1-phosphate uridylyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belo [...] (457 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1169 aa)
Geob_3713Peptidylprolyl cis-trans isomerase, PpiC-type, SurA family. (320 aa)
Geob_3744Hypothetical protein. (620 aa)
Geob_3805ResC/HemX-like cytochrome c biogenesis membrane protein. (239 aa)
Geob_3806ResB-like family cytochrome c biogenesis protein. (233 aa)
hup-1Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (94 aa)
prfCPeptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. (527 aa)
yidDMembrane protein insertion efficiency factor YidD, putative; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. (70 aa)
lptDLipopolysaccharide biogenesis outer membrane protein LptD, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. (688 aa)
murJUndecaprenyl-diphospho-oligosaccharide flippase, putative; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (522 aa)
yceGProtein of unknown function YceG; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. (374 aa)
Geob_1938ABC transporter, ATP-binding protein. (266 aa)
repATP-dependent DNA helicase Rep. (678 aa)
nifS-2Nitrogen fixation iron-sulfur cluster assembly cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. (378 aa)
Geob_2046Adenylate cyclase, class IV. (174 aa)
yaeTOuter membrane protein assembly complex protein YaeT; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (766 aa)
Geob_2098OmpH-like outer membrane protein, putative. (174 aa)
Geob_2139UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase, putative. (556 aa)
lptELipopolysaccharide biogenesis outer membrane chaperone lipoprotein LptE, putative. (170 aa)
Geob_2184FlgM family protein. (104 aa)
Geob_2186Short-chain acyl-CoA dehydrogenase. (379 aa)
Geob_2190Short-chain acyl-CoA dehydrogenase. (380 aa)
Geob_2191Short-chain acyl-CoA dehydrogenase. (380 aa)
lptALipopolysaccharide ABC transporter, periplasmic protein LptA. (172 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (339 aa)
ruvAHolliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (199 aa)
Geob_2381Lipoprotein, putative. (171 aa)
bbsG(R)-benzylsuccinyl-CoA dehydrogenase. (410 aa)
Geob_2461Nitrogenase vanadium-iron cofactor biosynthesis protein VnfN-related oxidoreductase subunit. (441 aa)
Geob_2466Nitrogenase vanadium-iron cofactor biosynthesis protein VnfE-related oxidoreductase subunit. (571 aa)
Geob_2467Nitrogenase vanadium-iron cofactor biosynthesis protein VnfN-related oxidoreductase subunit. (457 aa)
Geob_2491Nitrogenase vanadium-iron cofactor biosynthesis protein VnfN-related oxidoreductase subunit. (448 aa)
Geob_2500Nitrogenase vanadium-iron cofactor biosynthesis protein VnfE-related oxidoreductase subunit. (489 aa)
Geob_2501Nitrogenase vanadium-iron cofactor biosynthesis protein VnfN-related oxidoreductase subunit. (438 aa)
nifS-3Nitrogen fixation iron-sulfur cluster assembly cysteine desulfurase NifS. (399 aa)
Geob_2514PilZ domain protein. (123 aa)
nifS-4Nitrogen fixation iron-sulfur cluster assembly cysteine desulfurase NifS. (379 aa)
Geob_2539Nitrogenase vanadium-iron cofactor biosynthesis protein VnfE-related oxidoreductase subunit. (509 aa)
Geob_2540Nitrogenase vanadium-iron cofactor biosynthesis protein VnfN-related oxidoreductase subunit. (447 aa)
nifENNitrogenase molybdenum-iron cofactor biosynthesis protein NifEN; Belongs to the NifD/NifK/NifE/NifN family. (956 aa)
recGATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (770 aa)
pulOType II secretion system protein PulO, putative. (183 aa)
oxpGType II secretion system pseudopilin OxpG. (144 aa)
pilT-2Twitching motility pilus retraction ATPase. (356 aa)
priAPrimosomal protein N', ATP-dependent helicase; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (754 aa)
rhlE-1ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. (451 aa)
Geob_1301ResC/HemX-like cytochrome c biogenesis membrane protein. (271 aa)
Geob_1200VacJ family lipoprotein. (254 aa)
Geob_1199Hypothetical protein. (427 aa)
pilT-1Twitching motility pilus retraction ATPase. (382 aa)
Geob_1089Hypothetical protein, selenocysteine-containing. (185 aa)
lytSSensor histidine kinase LytS, GAF domain-containing; Domains: GAF, HisKA, HATPase_c. (572 aa)
rlpARare lipoprotein A-like double-psi beta-barrel domain protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (157 aa)
ftsZCell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (383 aa)
ftsQCell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. (275 aa)
ddlD-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (308 aa)
murBUDP-N-acetylenolpyruvylglucosamine (Si)-reductase; Cell wall formation. (303 aa)
murCUDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (458 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (366 aa)
ftsWProbable peptidoglycan glycosyltransferase FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. (367 aa)
murDUDP-N-acetylmuramyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (453 aa)
mraYPhospho-N-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (358 aa)
murFUDP-N-acetylmuramyl-L-alanyl-D-glutamyl-meso-2, 6-diaminopimelate--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (468 aa)
murEUDP-N-acetylmuramyl-L-alanyl-D-glutamate--meso- 2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (508 aa)
yfiOOuter membrane protein assembly lipoprotein YfiO, putative; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (244 aa)
typATranslation-regulating membrane GTPase TypA. (601 aa)
Geob_0744Outer membrane channel, putative. (211 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (417 aa)
prfAPeptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. (356 aa)
Geob_0679peptidyl-tRNA hydrolase-related protein. (139 aa)
flaFFlagellar biogenesis regulator FlaF. (128 aa)
flbTFlagellar biogenesis repressor FlbT. (129 aa)
flgKFlagellar hook-associated protein FlgK. (479 aa)
flgMNegative regulator of flagellin synthesis FlgM. (93 aa)
flgJFlagellar rod-binding protein FlgJ. (114 aa)
flgAFlagellar basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (226 aa)
flhGFlagellar biogenesis ATPase FlhG. (306 aa)
flhFFlagellar biogenesis protein FlhF. (450 aa)
flhAFlagellar biogenesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (693 aa)
Geob_0622Outer membrane surface lipoprotein. (414 aa)
rsfSProtein of unknown function DUF143; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. (128 aa)
uppPUndecaprenyl-diphosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (270 aa)
engBGTPase EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. (207 aa)
fliRFlagellar biogenesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (260 aa)
fliQFlagellar biogenesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
fliPFlagellar biogenesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (251 aa)
fliOFlagellar biogenesis protein FliO. (159 aa)
flgDFlagellar hook capping protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. (221 aa)
fliKFlagellar hook-length control protein FliK. (573 aa)
Geob_0499Hypothetical protein. (171 aa)
cas5dCRISPR-associated protein CasD. (234 aa)
pilT-3Twitching motility pilus retraction ATPase. (356 aa)
recQATP-dependent DNA helicase RecQ. (605 aa)
pcrAATP-dependent DNA helicase PcrA. (746 aa)
Geob_0369Membrane protein. (344 aa)
Geob_0323Toxin, RelE family. (103 aa)
Geob_0237glutaryl-CoA dehydrogenase, non-decarboxylating. (385 aa)
fadEVery-long-chain acyl-CoA dehydrogenase. (583 aa)
Geob_0057ResB-like family cytochrome c biogenesis protein, putative. (465 aa)
Geob_0056ResC/HemX-like cytochrome c biogenesis membrane protein. (277 aa)
gyrADNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (856 aa)
gyrBDNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (794 aa)
ccdA-2Cytochrome c biogenesis protein CcdA. (249 aa)
Geob_2747ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (446 aa)
Geob_2773FliK domain protein. (341 aa)
Geob_2838Lytic transglycosylase domain protein. (198 aa)
Geob_2913ABC transporter, ATP-binding protein. (276 aa)
Geob_3022Hypothetical protein. (382 aa)
nifS-1Nitrogen fixation iron-sulfur cluster assembly cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. (390 aa)
nifUNitrogen fixation iron-sulfur cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. (286 aa)
pilPType IV pilus assembly lipoprotein PilP. (194 aa)
pilOType IV pilus biogenesis protein PilO. (199 aa)
pilNType IV pilus biogenesis protein PilN. (190 aa)
pilWType IV pilus minor pilin PilW. (394 aa)
prfBPeptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. (370 aa)
Geob_3135LemA family lipoprotein. (194 aa)
Geob_3174FleN-like cytoskeletal ATPase, putative. (317 aa)
Geob_3184Hypothetical protein. (719 aa)
yhbYRNA-binding protein YhbY. (106 aa)
rhlE-2ATP-dependent RNA helicase RhlE. (443 aa)
Geob_3316Hydrolase, putative. (108 aa)
Geob_3320Hypothetical protein. (408 aa)
Geob_3344ResC/HemX-like cytochrome c biogenesis membrane protein. (275 aa)
Geob_3345ResB-like family cytochrome c biogenesis protein. (384 aa)
Geob_3354ResB-like family cytochrome c biogenesis protein. (309 aa)
Geob_3357Hypothetical protein. (826 aa)
rplTRibosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (117 aa)
pilAGeopilin. (218 aa)
pilT-4Twitching motility pilus retraction ATPase. (363 aa)
cas2CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (97 aa)
cas1CRISPR-associated endodeoxyribonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (344 aa)
csd2CRISPR-associated protein Csd2. (288 aa)
murIGlutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (283 aa)
recDExodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (609 aa)
recBExodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] (1083 aa)
recCExodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (1087 aa)
Geob_1427ResB-like family cytochrome c biogenesis protein. (455 aa)
Geob_1428ResC/HemX-like cytochrome c biogenesis membrane protein. (282 aa)
Geob_1488RNA-binding KH domain protein, putative; Belongs to the UPF0109 family. (76 aa)
frrRibosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. (185 aa)
ccdA-1Cytochrome c biogenesis protein CcdA. (242 aa)
topADNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (755 aa)
fdnG-1Formate dehydrogenase-N, alpha subunit; Periplasmically oriented, membrane-bound formate dehydrogenase, bis-(molybdopterin guanine dinucleotide)-oxotungsten-binding subunit, selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1010 aa)
fdnG-2Periplasmically oriented, membrane-bound formate dehydrogenase, bis-(molybdopterin guanine dinucleotide)-oxotungsten-binding subunit, selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1057 aa)
Geob_1691Bis-(molybdopterin guanine dinucleotide)-oxotungsten-binding oxidoreductase and desulfurase, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1139 aa)
dnaBReplicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (457 aa)
Geob_1754thioredoxin/NifU-like domain protein. (73 aa)
rhlBATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. (456 aa)
Geob_1790Hypothetical protein. (401 aa)
Geob_1859Lytic transglycosylase lipoprotein, putative. (215 aa)
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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