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apcD apcD apcF apcF CAK28788.1 CAK28788.1 apcE apcE apcA apcA apcB apcB apcC apcC cpcS-2 cpcS-2 cpcG1 cpcG1 mpeE mpeE cpcT cpcT aplA aplA cpcG2 cpcG2 cpeC cpeC mpeB mpeB mpeA mpeA mpeC mpeC rpcB rpcB rpcA rpcA rpcE rpcE rpcF rpcF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
apcDAllophycocyanin alpha-B chain; Photosynthesis. (164 aa)
apcFAllophycocyanin beta-18 subunit; Photosynthesis. (172 aa)
CAK28788.1SAM-dependent methyltransferase. (398 aa)
apcEAnchor polypeptide LCM; Photosynthesis; Belongs to the phycobilisome linker protein family. (953 aa)
apcAAllophycocyanin alpha chain; Photosynthesis. (161 aa)
apcBAllophycocyanin beta chain; Photosynthesis. (162 aa)
apcCPhycobilisome linker polypeptide, allophycocyanin-associated, core (LC 7.7); Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. (66 aa)
cpcS-2Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (196 aa)
cpcG1Phycobilisome rod-core linker polypeptide CpcG (L-RC 28.5); Photosynthesis; Belongs to the phycobilisome linker protein family. (252 aa)
mpeEPhycobilisome linker polypeptide, C-phycoerythrin class II-associated; Long gap in N-term region compared to WH8102; Photosynthesis; Belongs to the phycobilisome linker protein family. (278 aa)
cpcTConserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (201 aa)
aplAPossible photoresponsive regulatory phycobiliprotein; orthologs in other marine Synechococcus spp. also located in phycobilisome rod gene region. (196 aa)
cpcG2Phycobilisome rod-core linker polypeptide CpcG (L-RC 28.5); Photosynthesis; Belongs to the phycobilisome linker protein family. (257 aa)
cpeCPhycobilisome linker polypeptide, C-phycoerythrin class I-associated; Photosynthesis; Belongs to the phycobilisome linker protein family. (292 aa)
mpeBC-phycoerythrin class II beta chain; Photosynthesis. (178 aa)
mpeAC-phycoerythrin class II alpha chain; Photosynthesis. (165 aa)
mpeCC-phycoerythrin class II gamma chain, linker; Incorrect C-term; Photosynthesis; Belongs to the phycobilisome linker protein family. (293 aa)
rpcBR-phycocyanin II beta chain; Photosynthesis. (172 aa)
rpcAR-phycocyanin II alpha chain; Photosynthesis. (162 aa)
rpcEPhycobilin lyase alpha subunit; Photosynthesis. (274 aa)
rpcFPhycobilin lyase beta subunit; Photosynthesis. (218 aa)
Your Current Organism:
Synechococcus sp. RCC307
NCBI taxonomy Id: 316278
Other names: S. sp. RCC307, Synechococcus sp. MINSyn016-15m-01 substr. AC6A1
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