Your Input: | |
| | Tcr_0027 | PFAM: histidine kinase, HAMP region chemotaxis sensory transducer; KEGG: neu:NE1864 HAMP domain:bacterial chemotaxis sensory transducer. (959 aa) |
| | Tcr_0028 | Diguanylate phosphodiesterase (EAL domain); PFAM: EAL; KEGG: vch:VC1641 hypothetical protein. (255 aa) |
| | Tcr_0052 | KEGG: lpf:lpl0934 hypothetical protein. (112 aa) |
| | Tcr_0064 | Phosphate:Na+ symporter (PNaS) family transporter; PFAM: Na+/Pi-cotransporter; KEGG: vvy:VVA0097 hypothetical protein. (586 aa) |
| | Tcr_0066 | Periplasmic sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ana:alr3761 two-component hybrid sensor and regulator. (721 aa) |
| | Tcr_0077 | PFAM: histidine kinase, HAMP region chemotaxis sensory transducer; KEGG: xac:XAC3132 chemotaxis protein. (941 aa) |
| | Tcr_0090 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor; KEGG: pst:PSPTO1346 sensory box/GGDEF domain protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: PAS domain containing protein+B6621 conserved hypothetical protein; SMART: PAC motif. (420 aa) |
| | Tcr_0109 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein; KEGG: mca:MCA0842 GGDEF domain protein. (461 aa) |
| | Tcr_0116 | KEGG: ctc:CTC00836 hypothetical protein. (423 aa) |
| | Tcr_0135 | PFAM: response regulator receiver; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator. (132 aa) |
| | Tcr_0152 | Diguanylate cyclase/phosphodiesterase; KEGG: gsu:GSU0537 sensory box/GGDEF family protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL; SMART: PAC motif. (632 aa) |
| | Tcr_0166 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL response regulator receiver; KEGG: gsu:GSU1037 sensory box/response regulator. (697 aa) |
| | Tcr_0195 | PFAM: response regulator receiver; KEGG: cvi:CV0472 probable two-component response regulator. (300 aa) |
| | Tcr_0197 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor; KEGG: pae:PA0285 hypothetical protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein; SMART: PAS. (507 aa) |
| | Tcr_0200 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein; KEGG: bja:bll4347 hypothetical protein. (352 aa) |
| | Tcr_0204 | TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: eca:ECA3267 agglutination protein. (441 aa) |
| | Tcr_0205 | Transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; KEGG: cvi:CV0305 probable two-component response regulator. (205 aa) |
| | Tcr_0206 | TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD; KEGG: eca:ECA3269 HlyD family secretion protein. (430 aa) |
| | Tcr_0207 | Type I secretion system ATPase; PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: dps:DP0513 related to toxin secretion ATP-binding protein. (734 aa) |
| | Tcr_0208 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL histidine kinase, HAMP region; KEGG: dps:DP0517 hypothetical protein. (645 aa) |
| | Tcr_0209 | KEGG: dps:DP0518 hypothetical protein. (214 aa) |
| | Tcr_0210 | OmpA family protein; PFAM: Thrombospondin type 3 repeat OmpA/MotB; KEGG: gsu:GSU0360 OmpA domain protein. (314 aa) |
| | Tcr_0211 | PFAM: iron-containing alcohol dehydrogenase; KEGG: neu:NE0620 iron-containing alcohol dehydrogenase. (395 aa) |
| | rep | ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. (677 aa) |
| | Tcr_0213 | PFAM: methyltransferase small; KEGG: sth:STH3082 hypothetical protein. (192 aa) |
| | Tcr_0214 | Hypothetical protein; PFAM: import inner membrane translocase, subunit Tim44; KEGG: pae:PA5528 hypothetical protein. (306 aa) |
| | Tcr_0215 | Hypothetical protein. (153 aa) |
| | Tcr_0226 | PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS domain containing protein+B6621 response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like; KEGG: sme:SMa1142 FixL-related histidine kinase. (1018 aa) |
| | Tcr_0227 | Response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain); PFAM: EAL response regulator receiver; KEGG: lic:LIC11203 response regulator. (843 aa) |
| | Tcr_0358 | PFAM: MotA/TolQ/ExbB proton channel; KEGG: tpa:TP0725 flagellar motor rotation protein (motA). (275 aa) |
| | Tcr_0359 | PFAM: OmpA/MotB; KEGG: bms:BR1714 OmpA family protein. (241 aa) |
| | Tcr_0360 | OmpA/MotB family protein; PFAM: OmpA/MotB; KEGG: bca:BCE4639 sodium-driven polar flagellar protein PomB, putative. (230 aa) |
| | Tcr_0361 | PFAM: histidine kinase, HAMP region chemotaxis sensory transducer; KEGG: xac:XAC3132 chemotaxis protein. (601 aa) |
| | Tcr_0379 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: PAS domain containing protein+B6621 conserved hypothetical protein; KEGG: eba:ebA864 hypothetical protein. (540 aa) |
| | Tcr_0380 | Diguanylate cyclase (GGDEF domain); TIGRFAM: PAS sensor protein; PFAM: conserved hypothetical protein; KEGG: ppu:PP4405 sensory box protein. (249 aa) |
| | Tcr_0385 | MotA/TolQ/ExbB family protein; PFAM: MotA/TolQ/ExbB proton channel; KEGG: ppr:PBPRA0048 hypothetical MotA flagellar motor transmembrane protein. (258 aa) |
| | Tcr_0386 | PFAM: OmpA/MotB; KEGG: lpp:lpp1744 chemotaxis MotB protein. (248 aa) |
| | Tcr_0397 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein; KEGG: vfi:VFA0976 sensory box/GGDEF family protein. (555 aa) |
| | Tcr_0398 | Hypothetical protein. (189 aa) |
| | Tcr_0457 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein; KEGG: rpa:RPA2476 putative diguanylate cyclase (GGDEF). (349 aa) |
| | Tcr_0553 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; KEGG: neu:NE1863 probable chemotaxis transducer; TIGRFAM: PAS sensor protein; PFAM: PAS domain containing protein+B6621 chemotaxis sensory transducer; SMART: PAC motif. (888 aa) |
| | Tcr_0570 | PFAM: histidine kinase, HAMP region chemotaxis sensory transducer; KEGG: vvy:VV1004 methyl-accepting chemotaxis protein. (674 aa) |
| | Tcr_0574 | PFAM: histidine kinase, HAMP region chemotaxis sensory transducer; KEGG: neu:NE1864 HAMP domain:bacterial chemotaxis sensory transducer. (815 aa) |
| | Tcr_0728 | PFAM: CheW-like protein; KEGG: pae:PA0177 probable purine-binding chemotaxis protein. (185 aa) |
| | Tcr_0739 | PFAM: flagellar biosynthesis protein, FliO; KEGG: ppu:PP4356 flagellar assembly protein FliO. (152 aa) |
| | fliP | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (252 aa) |
| | fliQ | Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa) |
| | Tcr_0742 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (247 aa) |
| | flhB | Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (381 aa) |
| | flhA | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (697 aa) |
| | Tcr_0745 | Flagellar biosynthesis component FlhF; PFAM: GTP-binding signal recognition particle SRP54, G-domain; SMART: ATPase; KEGG: ilo:IL1119 flagellar biosynthetic protein FlhF. (388 aa) |
| | Tcr_0746 | Flagellar biosynthesis protein FlhG; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: ppu:PP4342 flagellar number regulator FleN. (297 aa) |
| | fliA | Sigma 28 (Flagella/Sporulation); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (241 aa) |
| | Tcr_0748 | PFAM: response regulator receiver; KEGG: pst:PSPTO1980 chemotaxis protein CheY. (137 aa) |
| | Tcr_0749 | Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (217 aa) |
| | Tcr_0750 | CheA signal transduction histidine kinase; PFAM: CheW-like protein ATP-binding region, ATPase-like Signal transducing histidine kinase, homodimeric Hpt; KEGG: ppu:PP4338 chemotaxis histidine kinase CheA. (650 aa) |
| | Tcr_0751 | PFAM: CheW-like protein; KEGG: pae:PA1464 probable purine-binding chemotaxis protein. (169 aa) |
| | Tcr_0752 | FlhB domain protein; KEGG: lpf:lpl2505 flagellar biosynthesis protein. (104 aa) |
| | Tcr_0753 | Hypothetical protein. (93 aa) |
| | Tcr_0754 | PFAM: response regulator receiver; KEGG: xoo:XOO2835 chemotaxis response regulator. (120 aa) |
| | Tcr_0755 | PFAM: CheW-like protein; KEGG: cheW, RSp1407; probable chemotaxis protein CheW. (176 aa) |
| | Tcr_0756 | KEGG: lpf:lpl2504 hypothetical protein. (343 aa) |
| | Tcr_0757 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (275 aa) |
| | cheB | Response regulator receiver (CheY-like) modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (376 aa) |
| | Tcr_0759 | PFAM: chemotaxis sensory transducer; KEGG: xac:XAC1996 chemotaxis protein. (406 aa) |
| | Tcr_0770 | Diguanylate phosphodiesterase (EAL domain); PFAM: EAL; KEGG: cvi:CV0657 hypothetical protein. (414 aa) |
| | Tcr_0776 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL histidine kinase, HAMP region; KEGG: aae:aq_367 hypothetical protein. (864 aa) |
| | Tcr_0777 | PFAM: histidine kinase, HAMP region chemotaxis sensory transducer; KEGG: xac:XAC1900 chemotaxis protein. (712 aa) |
| | Tcr_0785 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein; KEGG: wsu:WS1851 signal transduction response regulator-CheY like receiver and GGDEF domain. (502 aa) |
| | Tcr_0861 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein; KEGG: vch:VCA0965 GGDEF family protein. (332 aa) |
| | Tcr_0903 | Hypothetical protein; predicted membrane protein. (87 aa) |
| | Tcr_0905 | Signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region, ATPase-like histidine kinase A-like; KEGG: mca:MCA2542 nitrogen regulation protein NR(II). (360 aa) |
| | ntrC | Nitrogen metabolism transcriptional regulator, NtrC, Fis family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (487 aa) |
| | Tcr_0912 | PFAM: nitrogen regulatory protein P-II; KEGG: aci:ACIAD0244 regulatory protein, P-II 2, for nitrogen assimilation by glutamine synthetase, regulates GlnL (NRII) and GlnE (ATase). (112 aa) |
| | Tcr_0954 | PFAM: Rh-like protein/ammonium transporter; KEGG: vvu:VV12598 ammonia permease. (405 aa) |
| | Tcr_0967 | PFAM: cytochrome B561; KEGG: lpn:lpg1646 cytochrome b561 transmembrane protein. (181 aa) |
| | Tcr_0968 | Histidine kinase; PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: ecc:c2604 sensor protein BaeS. (455 aa) |
| | Tcr_0969 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: gsu:GSU3118 DNA-binding response regulator. (226 aa) |
| | Tcr_1021 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein; KEGG: son:SO0796 GGDEF family protein. (300 aa) |
| | Tcr_1038 | Anti-sigma-factor antagonist (STAS) domain protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pae:PA3347 hypothetical protein. (100 aa) |
| | Tcr_1039 | PFAM: response regulator receiver Stage II sporulation E; SMART: Protein phosphatase 2C-like; KEGG: pst:PSPTO1964 response regulator. (567 aa) |
| | Tcr_1040 | Response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like; KEGG: lpf:lpl0329 hypothetical protein. (417 aa) |
| | Tcr_1041 | PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase-like; KEGG: rba:RB3606 probable sensor protein FixL. (530 aa) |
| | Tcr_1062 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein Diverse 7TM receptor, transmembrane region; KEGG: ilo:IL2366 signaling protein with a acyltransferase and GGDEF domains. (566 aa) |
| | Tcr_1080 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: vpa:VPA1176 hypothetical protein. (767 aa) |
| | Tcr_1095 | PFAM: response regulator receiver; KEGG: vch:VCA1096 chemotaxis protein CheY. (118 aa) |
| | Tcr_1108 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein response regulator receiver; KEGG: rpa:RPA3132 putative diguanylate cyclase (GGDEF) with response regulator receiver domain. (454 aa) |
| | Tcr_1143 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein; KEGG: wsu:WS1851 signal transduction response regulator-CheY like receiver and GGDEF domain. (532 aa) |
| | Tcr_1150 | Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); KEGG: mca:MCA1673 sensory box protein/GGDEF domain protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: PAS domain containing protein+B6621 conserved hypothetical protein EAL GAF; SMART: PAC motif. (1466 aa) |
| | Tcr_1202 | PFAM: ATP-binding region, ATPase-like histidine kinase A-like; KEGG: son:SO2192 sensor histidine kinase. (519 aa) |
| | Tcr_1203 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; KEGG: ppr:PBPRB0758 putative DNA-binding response regulator. (233 aa) |
| | Tcr_1204 | KEGG: syc:syc1756_d hypothetical protein. (310 aa) |
| | Tcr_1205 | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (500 aa) |
| | Tcr_1206 | Hypothetical protein; predicted membrane protein. (150 aa) |
| | Tcr_1222 | TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL histidine kinase, HAMP region; KEGG: syn:sll0267 hypothetical protein. (815 aa) |
| | Tcr_1271 | PFAM: response regulator receiver CheW-like protein; KEGG: wsu:WS0257 putative chemotaxis protein. (325 aa) |
| | glnD | UTP-GlnB (protein PII) uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. (888 aa) |
| | Tcr_1297 | TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: gsu:GSU0474 sensory box/GGDEF family protein. (891 aa) |
| | Tcr_1339 | PFAM: nitrogen regulatory protein P-II; KEGG: cvi:CV2045 nitrogen regulatory protein P-II-1; Belongs to the P(II) protein family. (112 aa) |
| | Tcr_1340 | TIGRFAM: ammonium transporter; PFAM: Rh-like protein/ammonium transporter; KEGG: ppr:PBPRA3185 putative ammonium transporter. (417 aa) |
| | Tcr_1382 | PFAM: regulatory protein, LuxR response regulator receiver; KEGG: sco:SCO5785 two-component regulator. (232 aa) |
| | Tcr_1383 | Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like Hpt; KEGG: bba:Bd3528 signal transduction histidine kinase. (642 aa) |
| | Tcr_1390 | PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pst:PSPTO1963 STAS domain protein. (96 aa) |
| | Tcr_1394 | PFAM: histidine kinase, HAMP region chemotaxis sensory transducer; KEGG: xcc:XCC1879 chemotaxis protein. (840 aa) |
| | Tcr_1404 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein; KEGG: vpa:VP2366 putative GGDEF family protein. (305 aa) |
| | Tcr_1431 | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (153 aa) |
| | Tcr_1432 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (339 aa) |
| | Tcr_1433 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (197 aa) |
| | Tcr_1434 | Flagellar motor protein MotB; PFAM: OmpA/MotB; KEGG: xcc:XCC3654 chemotaxis MotB protein. (296 aa) |
| | Tcr_1435 | KEGG: xoo:XOO0688 chemotaxis protein. (273 aa) |
| | Tcr_1436 | PFAM: chemotaxis sensory transducer; KEGG: vvy:VV1088 methyl-accepting chemotaxis protein. (330 aa) |
| | Tcr_1437 | PFAM: flagellar hook-length control protein; KEGG: ddi:DDB0192009 hypothetical protein. (650 aa) |
| | Tcr_1438 | TIGRFAM: flagellar export protein FliJ; KEGG: ilo:IL1196 flagellar biosynthesis chaperone. (149 aa) |
| | Tcr_1439 | Flagellar biosynthesis ATPase FliI; KEGG: pae:PA1104 flagellum-specific ATP synthase FliI; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: ATPase. (446 aa) |
| | Tcr_1440 | PFAM: flagellar assembly protein FliH; KEGG: ppu:PP4367 flagellar assembly protein FliH. (276 aa) |
| | Tcr_1441 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (339 aa) |
| | Tcr_1442 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (561 aa) |
| | fliE | TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: pae:PA1100 flagellar hook-basal body complex protein FliE. (110 aa) |
| | Tcr_1444 | Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver sigma-54 factor, interaction region helix-turn-helix, Fis-type; SMART: ATPase; KEGG: vfi:VF1854 FlrC; two-component response regulator. (459 aa) |
| | Tcr_1445 | PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like histidine kinase A-like; SMART: PAS; KEGG: neu:NE2082 putative two-component sensor. (390 aa) |
| | Tcr_1446 | Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor, interaction region helix-turn-helix, Fis-type; SMART: ATPase; KEGG: lpp:lpp0915 transcriptional regulator FleQ. (366 aa) |
| | Tcr_1447 | Hypothetical protein. (98 aa) |
| | Tcr_1448 | PFAM: flagellar protein FliS; KEGG: stt:t0916 flagellar protein FliS. (144 aa) |
| | Tcr_1449 | Flagellar filament cap protein FliD/FlaH; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (781 aa) |
| | Tcr_1450 | KEGG: vch:VC2141 flagellin FlaG. (147 aa) |
| | Tcr_1451 | PFAM: flagellar protein FlaG protein; KEGG: cvi:CV3877 Flagellin protein. (136 aa) |
| | Tcr_1452 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (287 aa) |
| | Tcr_1453 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (287 aa) |
| | Tcr_1464 | PFAM: flagellin-like; KEGG: cvi:CV2878 flagellar hook-associated protein 3. (341 aa) |
| | Tcr_1465 | TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078-like; KEGG: xcc:XCC1943 flagellar hook-associated protein 1 FlgK. (630 aa) |
| | Tcr_1466 | Peptidoglycan hydrolase FlgJ; KEGG: stm:STM1182 flagellar biosynthesis. (155 aa) |
| | flgI | Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (366 aa) |
| | flgH | Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (250 aa) |
| | Tcr_1469 | TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein protein of unknown function DUF1078-like; KEGG: ilo:IL1142 flagella basal body rod protein; Belongs to the flagella basal body rod proteins family. (263 aa) |
| | Tcr_1470 | TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein protein of unknown function DUF1078-like; KEGG: pae:PA1081 flagellar basal-body rod protein FlgF. (245 aa) |
| | Tcr_1471 | PFAM: flagellar basal body rod protein protein of unknown function DUF1078-like; KEGG: lpn:lpg1219 flagellar hook protein FlgE. (538 aa) |
| | Tcr_1472 | Flagellar hook capping protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. (227 aa) |
| | Tcr_1473 | TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078-like; KEGG: ppr:PBPRA0902 putative flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (136 aa) |
| | Tcr_1474 | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (133 aa) |
| | Tcr_1476 | CheW protein; PFAM: response regulator receiver CheW-like protein; KEGG: pae:PA3349 probable chemotaxis protein. (324 aa) |
| | Tcr_1477 | Flageller basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (245 aa) |
| | Tcr_1478 | PFAM: Anti-sigma-28 factor, FlgM; KEGG: vpa:VP0771 polar flagellar FlgM. (101 aa) |
| | Tcr_1479 | Flagellum biogenesis protein FlgN; PFAM: FlgN. (162 aa) |
| | Tcr_1480 | Hypothetical protein. (190 aa) |
| | Tcr_1483 | KEGG: syn:slr1753 hypothetical protein. (460 aa) |
| | Tcr_1499 | PFAM: nitrogen regulatory protein P-II; KEGG: bbr:BB2035 nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (112 aa) |
| | Tcr_1500 | TIGRFAM: ammonium transporter; PFAM: Rh-like protein/ammonium transporter; KEGG: dps:DP0326 ammonium transporter. (414 aa) |
| | Tcr_1502 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (264 aa) |
| | Tcr_1523 | OmpA/MotB family protein; PFAM: OmpA/MotB; KEGG: oih:OB2224 flagellar motor aparatus. (248 aa) |
| | Tcr_1524 | MotA/TolQ/ExbB family protein; PFAM: MotA/TolQ/ExbB proton channel; KEGG: ppr:PBPRA0808 putative sodium-driven polar flagellar protein MotA. (255 aa) |
| | Tcr_1586 | MotA/TolQ/ExbB family protein; PFAM: MotA/TolQ/ExbB proton channel; KEGG: vfi:VFA0186 chemotaxis MotA protein. (263 aa) |
| | Tcr_1587 | OmpA/MotB family protein; PFAM: OmpA/MotB; KEGG: vfi:VFA0187 chemotaxis MotB protein. (259 aa) |
| | Tcr_1612 | CheA signal transduction histidine kinase; PFAM: CheW-like protein ATP-binding region, ATPase-like Signal transducing histidine kinase, homodimeric Hpt; KEGG: vch:VCA1095 chemotaxis protein CheA. (694 aa) |
| | cheD | CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (191 aa) |
| | Tcr_1820 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein CBS domain containing protein EAL; KEGG: son:SO0555 hypothetical protein. (599 aa) |
| | Tcr_1897 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; KEGG: xac:XAC1900 chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: PAS domain containing protein+B6621 histidine kinase, HAMP region chemotaxis sensory transducer; SMART: PAC motif. (1170 aa) |
| | Tcr_1911 | PFAM: metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD region; KEGG: son:SO0860 response regulator. (268 aa) |
| | Tcr_1913 | KEGG: mac:MA2013 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS domain containing protein+B6621 ATP-binding region, ATPase-like histidine kinase A-like; SMART: PAC motif. (1118 aa) |
| | Tcr_1920 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor; KEGG: wsu:WS0850 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein extracellular solute-binding protein, family 3; SMART: PAC motif. (893 aa) |
| | Tcr_1924 | KEGG: wsu:WS0212 hybrid sensory histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS domain containing protein+B6621 response regulator receiver ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; SMART: PAC motif. (901 aa) |
| | Tcr_1931 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: eba:p1B362 sensory box protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: PAS domain containing protein+B6621 conserved hypothetical protein EAL; SMART: PAC motif. (1289 aa) |
| | Tcr_1937 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein extracellular solute-binding protein, family 3; KEGG: wsu:WS0850 sensory transduction histidine kinase. (775 aa) |
| | Tcr_1984 | TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region chemotaxis sensory transducer; KEGG: xcc:XCC1876 chemotaxis protein. (954 aa) |
| | Tcr_1999 | PFAM: histidine kinase, HAMP region chemotaxis sensory transducer; KEGG: ppu:PP5020 methyl-accepting chemotaxis transducer. (405 aa) |
| | Tcr_2004 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; KEGG: ccr:CC3349 methyl-accepting chemotaxis protein McpH; TIGRFAM: PAS sensor protein; PFAM: PAS domain containing protein+B6621 chemotaxis sensory transducer; SMART: PAC motif. (591 aa) |
| | Tcr_2008 | TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: ppu:PP0672 sensory box protein. (703 aa) |
| | Tcr_2010 | KEGG: dps:DP2993 probable methyl-accepting chemotaxis protein (McpB). (243 aa) |
| | Tcr_2068 | PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS domain containing protein+B6621 response regulator receiver GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: gka:GK1468 hypothetical protein. (948 aa) |
| | Tcr_2131 | TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: ppr:PBPRB0723 putative signal transduction protein. (501 aa) |
| | Tcr_2133 | TIGRFAM: flagellar protein FliS; KEGG: vch:VC2138 flagellar protein FliS. (144 aa) |
| | Tcr_2145 | CheW protein; KEGG: wsu:WS1946 hypothetical protein. (692 aa) |
| | Tcr_2151 | TIGRFAM: diguanylate cyclase ammonium transporter; PFAM: conserved hypothetical protein Rh-like protein/ammonium transporter; KEGG: syn:sll0537 ammonium/methylammonium permease. (611 aa) |
| | Tcr_2179 | PFAM: response regulator receiver metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD region; KEGG: son:SO0860 response regulator. (348 aa) |
| | Tcr_2180 | PAS/PAC sensor hybrid histidine kinase; KEGG: pae:PA3946 probable two-component sensor; TIGRFAM: PAS sensor protein; PFAM: extracellular solute-binding protein, family 3 response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like; SMART: PAS. (1410 aa) |
| | Tcr_2187 | Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: mca:MCA1713 sigma-54 dependent DNA-binding response regulator; TIGRFAM: Helix-turn-helix, Fis-type; PFAM: response regulator receiver sigma-54 factor, interaction region; SMART: ATPase. (456 aa) |
| | Tcr_2188 | Hypothetical protein. (201 aa) |
| | Tcr_2189 | Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: neu:NE0015 sensory transduction histidine kinases. (494 aa) |
| | Tcr_2190 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: pae:PA0575 hypothetical protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: PAS domain containing protein+B6621 conserved hypothetical protein CBS domain containing protein EAL; SMART: PAC motif. (963 aa) |
