STRINGSTRING
Tcr_0379 Tcr_0379 Tcr_0380 Tcr_0380 Tcr_0861 Tcr_0861 Tcr_2008 Tcr_2008 Tcr_2190 Tcr_2190
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tcr_0379Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: PAS domain containing protein+B6621 conserved hypothetical protein; KEGG: eba:ebA864 hypothetical protein. (540 aa)
Tcr_0380Diguanylate cyclase (GGDEF domain); TIGRFAM: PAS sensor protein; PFAM: conserved hypothetical protein; KEGG: ppu:PP4405 sensory box protein. (249 aa)
Tcr_0861TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein; KEGG: vch:VCA0965 GGDEF family protein. (332 aa)
Tcr_2008TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: ppu:PP0672 sensory box protein. (703 aa)
Tcr_2190Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: pae:PA0575 hypothetical protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: PAS domain containing protein+B6621 conserved hypothetical protein CBS domain containing protein EAL; SMART: PAC motif. (963 aa)
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
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