STRINGSTRING
Tcr_0778 Tcr_0778 Tcr_1029 Tcr_1029 Tcr_1336 Tcr_1336 Tcr_1337 Tcr_1337 Tcr_1578 Tcr_1578
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tcr_0778KEGG: cvi:CV0743 hypothetical protein. (83 aa)
Tcr_1029KEGG: ppr:PBPRA2977 hypothetical protein. (77 aa)
Tcr_1336KEGG: vvu:VV20035 hypothetical protein. (130 aa)
Tcr_1337Betaine/Carnitine/Choline (BCCT) family transporter; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: ilo:IL2388 choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (687 aa)
Tcr_1578Hypothetical protein. (221 aa)
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
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