STRINGSTRING
Tcr_0776 Tcr_0776 Tcr_0028 Tcr_0028 Tcr_0122 Tcr_0122 Tcr_0152 Tcr_0152 Tcr_0166 Tcr_0166 Tcr_0208 Tcr_0208 Tcr_0227 Tcr_0227 Tcr_0770 Tcr_0770 Tcr_0860 Tcr_0860 Tcr_1080 Tcr_1080 Tcr_1089 Tcr_1089 Tcr_1150 Tcr_1150 Tcr_1222 Tcr_1222 Tcr_1297 Tcr_1297 Tcr_1773 Tcr_1773 Tcr_1820 Tcr_1820 Tcr_1888 Tcr_1888 Tcr_1931 Tcr_1931 Tcr_2008 Tcr_2008 Tcr_2024 Tcr_2024 Tcr_2048 Tcr_2048 Tcr_2131 Tcr_2131 Tcr_2190 Tcr_2190
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tcr_0776TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL histidine kinase, HAMP region; KEGG: aae:aq_367 hypothetical protein. (864 aa)
Tcr_0028Diguanylate phosphodiesterase (EAL domain); PFAM: EAL; KEGG: vch:VC1641 hypothetical protein. (255 aa)
Tcr_0122Diguanylate phosphodiesterase; PFAM: EAL; KEGG: lpp:lpp0127 hypothetical protein. (400 aa)
Tcr_0152Diguanylate cyclase/phosphodiesterase; KEGG: gsu:GSU0537 sensory box/GGDEF family protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL; SMART: PAC motif. (632 aa)
Tcr_0166TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL response regulator receiver; KEGG: gsu:GSU1037 sensory box/response regulator. (697 aa)
Tcr_0208TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL histidine kinase, HAMP region; KEGG: dps:DP0517 hypothetical protein. (645 aa)
Tcr_0227Response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain); PFAM: EAL response regulator receiver; KEGG: lic:LIC11203 response regulator. (843 aa)
Tcr_0770Diguanylate phosphodiesterase (EAL domain); PFAM: EAL; KEGG: cvi:CV0657 hypothetical protein. (414 aa)
Tcr_0860Diguanylate phosphodiesterase (EAL domain); PFAM: EAL; KEGG: lpp:lpp0127 hypothetical protein. (397 aa)
Tcr_1080TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: vpa:VPA1176 hypothetical protein. (767 aa)
Tcr_1089TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL histidine kinase, HAMP region; KEGG: gsu:GSU1037 sensory box/response regulator. (667 aa)
Tcr_1150Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); KEGG: mca:MCA1673 sensory box protein/GGDEF domain protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: PAS domain containing protein+B6621 conserved hypothetical protein EAL GAF; SMART: PAC motif. (1466 aa)
Tcr_1222TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL histidine kinase, HAMP region; KEGG: syn:sll0267 hypothetical protein. (815 aa)
Tcr_1297TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: gsu:GSU0474 sensory box/GGDEF family protein. (891 aa)
Tcr_1773TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: ppu:PP0672 sensory box protein. (788 aa)
Tcr_1820TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein CBS domain containing protein EAL; KEGG: son:SO0555 hypothetical protein. (599 aa)
Tcr_1888Diguanylate phosphodiesterase (EAL domain); PFAM: EAL; KEGG: lpp:lpp0127 hypothetical protein. (400 aa)
Tcr_1931Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: eba:p1B362 sensory box protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: PAS domain containing protein+B6621 conserved hypothetical protein EAL; SMART: PAC motif. (1289 aa)
Tcr_2008TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: ppu:PP0672 sensory box protein. (703 aa)
Tcr_2024TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: gsu:GSU0474 sensory box/GGDEF family protein. (665 aa)
Tcr_2048TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL histidine kinase, HAMP region; KEGG: ppr:PBPRA3534 hipothetical sensory box/GGDEF family protein. (671 aa)
Tcr_2131TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: ppr:PBPRB0723 putative signal transduction protein. (501 aa)
Tcr_2190Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: pae:PA0575 hypothetical protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: PAS domain containing protein+B6621 conserved hypothetical protein CBS domain containing protein EAL; SMART: PAC motif. (963 aa)
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
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