Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DFI_01700 | DFI_06420 | GCA_000419625_00805 | GCA_000419625_02631 | Arginase; Belongs to the arginase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.915 |
| DFI_01700 | DFI_15310 | GCA_000419625_00805 | GCA_000419625_03142 | Arginase; Belongs to the arginase family. | Argininosuccinate lyase. | 0.817 |
| DFI_01700 | DFI_17650 | GCA_000419625_00805 | GCA_000419625_03264 | Arginase; Belongs to the arginase family. | Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.972 |
| DFI_01700 | argH | GCA_000419625_00805 | GCA_000419625_01233 | Arginase; Belongs to the arginase family. | Argininosuccinate lyase. | 0.817 |
| DFI_01700 | argJ | GCA_000419625_00805 | GCA_000419625_02470 | Arginase; Belongs to the arginase family. | Arginine biosynthesis bifunctional protein ArgJ alpha chain; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.912 |
| DFI_01700 | lysJ | GCA_000419625_00805 | GCA_000419625_02231 | Arginase; Belongs to the arginase family. | [LysW]-aminoadipate semialdehyde transaminase; Catalyzes the transfer of the amino group of L-glutamate to [LysW]-aminoadipate 6-semialdehyde, generating [LysW]-gamma-L-lysine. Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. LysJ subfamily. | 0.451 |
| DFI_01700 | lysK | GCA_000419625_00805 | GCA_000419625_00506 | Arginase; Belongs to the arginase family. | [LysW]-lysine hydrolase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine. | 0.903 |
| DFI_04480 | DFI_08970 | GCA_000419625_00241 | GCA_000419625_02120 | Saccharopine dehydrogenase. | Lysine 2,3-aminomutase. | 0.900 |
| DFI_04480 | lysA | GCA_000419625_00241 | GCA_000419625_00285 | Saccharopine dehydrogenase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.919 |
| DFI_04480 | lysK | GCA_000419625_00241 | GCA_000419625_00506 | Saccharopine dehydrogenase. | [LysW]-lysine hydrolase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine. | 0.900 |
| DFI_06420 | DFI_01700 | GCA_000419625_02631 | GCA_000419625_00805 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginase; Belongs to the arginase family. | 0.915 |
| DFI_06420 | DFI_15310 | GCA_000419625_02631 | GCA_000419625_03142 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate lyase. | 0.803 |
| DFI_06420 | DFI_17650 | GCA_000419625_02631 | GCA_000419625_03264 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.853 |
| DFI_06420 | argB | GCA_000419625_02631 | GCA_000419625_01514 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.895 |
| DFI_06420 | argC | GCA_000419625_02631 | GCA_000419625_02628 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | 0.960 |
| DFI_06420 | argG | GCA_000419625_02631 | GCA_000419625_01229 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.996 |
| DFI_06420 | argH | GCA_000419625_02631 | GCA_000419625_01233 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate lyase. | 0.812 |
| DFI_06420 | argJ | GCA_000419625_02631 | GCA_000419625_02470 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine biosynthesis bifunctional protein ArgJ alpha chain; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.994 |
| DFI_06420 | argR | GCA_000419625_02631 | GCA_000419625_01476 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine repressor; Regulates arginine biosynthesis genes. | 0.752 |
| DFI_06420 | lysJ | GCA_000419625_02631 | GCA_000419625_02231 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | [LysW]-aminoadipate semialdehyde transaminase; Catalyzes the transfer of the amino group of L-glutamate to [LysW]-aminoadipate 6-semialdehyde, generating [LysW]-gamma-L-lysine. Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. LysJ subfamily. | 0.743 |
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