STRINGSTRING
DFI_05660 DFI_05660 DFI_05400 DFI_05400 DFI_04810 DFI_04810 DFI_04610 DFI_04610 DFI_04520 DFI_04520 DFI_02005 DFI_02005 DFI_01055 DFI_01055 DFI_00555 DFI_00555 DFI_12675 DFI_12675 DFI_12660 DFI_12660 DFI_11365 DFI_11365 DFI_10550 DFI_10550 DFI_10545 DFI_10545 DFI_10530 DFI_10530 DFI_10525 DFI_10525 DFI_10145 DFI_10145 DFI_10075 DFI_10075 DFI_10070 DFI_10070 DFI_08530 DFI_08530 DFI_07265 DFI_07265 DFI_06325 DFI_06325 DFI_06310 DFI_06310 DFI_06225 DFI_06225 DFI_06220 DFI_06220 DFI_06215 DFI_06215 DFI_17950 DFI_17950
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFI_05660Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (265 aa)
DFI_05400Oxidoreductase. (336 aa)
DFI_04810CoA transferase; Belongs to the CoA-transferase III family. (281 aa)
DFI_04610Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)
DFI_04520Acyl-CoA dehydrogenase. (386 aa)
DFI_02005Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (251 aa)
DFI_01055Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (273 aa)
DFI_00555Acyl-CoA dehydrogenase. (612 aa)
DFI_12675Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
DFI_126603-hydroxybutyryl-CoA dehydrogenase. (278 aa)
DFI_11365Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (388 aa)
DFI_10550Succinyl-CoA--3-ketoacid-CoA transferase. (231 aa)
DFI_10545Succinyl-CoA--3-ketoacid-CoA transferase. (209 aa)
DFI_10530Methylcrotonoyl-CoA carboxylase. (560 aa)
DFI_10525Acyl-CoA dehydrogenase. (402 aa)
DFI_10145Long-chain fatty acid--CoA ligase. (565 aa)
DFI_10075Electron transfer flavoprotein subunit alpha. (315 aa)
DFI_10070Electron transfer flavoprotein subunit beta. (253 aa)
DFI_085303-hydroxyacyl-CoA dehydrogenase. (699 aa)
DFI_07265Acyl-CoA dehydrogenase. (378 aa)
DFI_06325Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
DFI_063103-hydroxyacyl-CoA dehydrogenase. (789 aa)
DFI_06225Uncharacterized protein. (89 aa)
DFI_06220Succinyl-CoA--3-ketoacid-CoA transferase; Belongs to the 3-oxoacid CoA-transferase family. (455 aa)
DFI_06215Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (431 aa)
DFI_17950Uncharacterized protein. (268 aa)
Your Current Organism:
Deinococcus ficus
NCBI taxonomy Id: 317577
Other names: CCUG 51391, CIP 108832, D. ficus, DSM 17424 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], DSM 19119, Deinococcus ficus Lai et al. 2006 emend. Kampfer 2009, Deinococcus mumbaiensis, Deinococcus mumbaiensis Shashidhar and Bandekar 2006, Deinococcus sp. 2009, Deinococcus sp. CC-FR2-10, Deinococcus sp. UK, MTCC 7297 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], strain CC-FR2-10, strain CON-1 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]]
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