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glgA glgA DFI_04395 DFI_04395 DFI_03750 DFI_03750 DFI_03490 DFI_03490 DFI_13145 DFI_13145 DFI_10960 DFI_10960 DFI_10500 DFI_10500 DFI_09680 DFI_09680 glgB glgB DFI_09180 DFI_09180 DFI_09120 DFI_09120 DFI_09010 DFI_09010 glgC glgC DFI_05820 DFI_05820 DFI_18155 DFI_18155 DFI_17115 DFI_17115
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glgAGlycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (448 aa)
DFI_04395Alpha-amylase. (519 aa)
DFI_03750Alpha-glucan phosphorylase. (838 aa)
DFI_03490Aamy domain-containing protein. (517 aa)
DFI_13145Amino acid transporter. (734 aa)
DFI_10960Alpha-amylase. (546 aa)
DFI_10500Glucose-1-phosphate adenylyltransferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (442 aa)
DFI_09680Phosphoglucomutase, alpha-D-glucose phosphate-specific. (546 aa)
glgB1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (638 aa)
DFI_09180Alpha-amylase. (485 aa)
DFI_091204-alpha-glucanotransferase. (504 aa)
DFI_09010Alpha-glycosidase. (605 aa)
glgCGlucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (413 aa)
DFI_05820Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family. (716 aa)
DFI_18155Glyco_trans_4-like_N domain-containing protein. (371 aa)
DFI_17115Alpha-dextran endo-1,6-alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family. (1111 aa)
Your Current Organism:
Deinococcus ficus
NCBI taxonomy Id: 317577
Other names: CCUG 51391, CIP 108832, D. ficus, DSM 17424 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], DSM 19119, Deinococcus ficus Lai et al. 2006 emend. Kampfer 2009, Deinococcus mumbaiensis, Deinococcus mumbaiensis Shashidhar and Bandekar 2006, Deinococcus sp. 2009, Deinococcus sp. CC-FR2-10, Deinococcus sp. UK, MTCC 7297 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], strain CC-FR2-10, strain CON-1 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]]
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