STRINGSTRING
DFI_04815 DFI_04815 DFI_03050 DFI_03050 DFI_01630 DFI_01630 DFI_01535 DFI_01535 DFI_01200 DFI_01200 DFI_01135 DFI_01135 DFI_01045 DFI_01045 DFI_01010 DFI_01010 DFI_00850 DFI_00850 DFI_13610 DFI_13610 DFI_13535 DFI_13535 DFI_13495 DFI_13495 DFI_13375 DFI_13375 DFI_12555 DFI_12555 DFI_11335 DFI_11335 DFI_10755 DFI_10755 DFI_09630 DFI_09630 DFI_08760 DFI_08760 DFI_08715 DFI_08715 DFI_07790 DFI_07790 DFI_06290 DFI_06290 recF recF DFI_06280 DFI_06280 DFI_14265 DFI_14265 DFI_17085 DFI_17085 DFI_17485 DFI_17485 DFI_17490 DFI_17490
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFI_04815Uncharacterized protein. (308 aa)
DFI_03050SAM-dependent methyltransferase. (301 aa)
DFI_01630Uncharacterized protein. (458 aa)
DFI_01535Uncharacterized protein. (334 aa)
DFI_01200Uncharacterized protein. (237 aa)
DFI_01135Uncharacterized protein. (271 aa)
DFI_01045GH26 domain-containing protein; Belongs to the glycosyl hydrolase 26 family. (542 aa)
DFI_01010Uncharacterized protein. (504 aa)
DFI_00850Cobalamin biosynthesis protein CbiX. (469 aa)
DFI_13610Copper amine oxidase. (596 aa)
DFI_13535N-acetyltransferase. (309 aa)
DFI_13495Uncharacterized protein. (773 aa)
DFI_13375Histidinol-phosphatase. (325 aa)
DFI_12555Carbon-nitrogen hydrolase family protein. (416 aa)
DFI_11335PAS domain-containing protein. (217 aa)
DFI_10755Uncharacterized protein. (652 aa)
DFI_09630SAM-dependent methyltransferase. (249 aa)
DFI_08760Alkyl hydroperoxide reductase. (150 aa)
DFI_08715META domain-containing protein. (395 aa)
DFI_07790DUF4139 domain-containing protein. (431 aa)
DFI_06290N-formylglutamate amidohydrolase. (261 aa)
recFDNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (369 aa)
DFI_06280Uncharacterized protein. (285 aa)
DFI_14265Uncharacterized protein. (183 aa)
DFI_17085Cobalamin biosynthesis protein CbiX. (472 aa)
DFI_17485Uncharacterized protein. (405 aa)
DFI_17490Uncharacterized protein. (417 aa)
Your Current Organism:
Deinococcus ficus
NCBI taxonomy Id: 317577
Other names: CCUG 51391, CIP 108832, D. ficus, DSM 17424 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], DSM 19119, Deinococcus ficus Lai et al. 2006 emend. Kampfer 2009, Deinococcus mumbaiensis, Deinococcus mumbaiensis Shashidhar and Bandekar 2006, Deinococcus sp. 2009, Deinococcus sp. CC-FR2-10, Deinococcus sp. UK, MTCC 7297 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], strain CC-FR2-10, strain CON-1 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]]
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