STRINGSTRING
DFI_03475 DFI_03475 DFI_02260 DFI_02260 DFI_11210 DFI_11210 DFI_11020 DFI_11020 bshC bshC DFI_06775 DFI_06775 GCA_000419625_02694 GCA_000419625_02694 DFI_06120 DFI_06120 DFI_06115 DFI_06115 DFI_06105 DFI_06105
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFI_03475PIG-L domain-containing protein. (232 aa)
DFI_02260Magnesium chelatase. (481 aa)
DFI_11210Bacillithiol biosynthesis deacetylase BshB1. (241 aa)
DFI_11020VWFA domain-containing protein. (402 aa)
bshCPutative cysteine ligase BshC; Belongs to the BshC family. (518 aa)
DFI_06775N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. (370 aa)
GCA_000419625_02694annotation not available (145 aa)
DFI_06120Uncharacterized protein. (129 aa)
DFI_06115DinB_2 domain-containing protein. (173 aa)
DFI_06105GlcNAc-PI de-N-acetylase. (251 aa)
Your Current Organism:
Deinococcus ficus
NCBI taxonomy Id: 317577
Other names: CCUG 51391, CIP 108832, D. ficus, DSM 17424 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], DSM 19119, Deinococcus ficus Lai et al. 2006 emend. Kampfer 2009, Deinococcus mumbaiensis, Deinococcus mumbaiensis Shashidhar and Bandekar 2006, Deinococcus sp. 2009, Deinococcus sp. CC-FR2-10, Deinococcus sp. UK, MTCC 7297 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], strain CC-FR2-10, strain CON-1 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]]
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