STRINGSTRING
DFI_02150 DFI_02150 DFI_02145 DFI_02145 DFI_02140 DFI_02140 DFI_02135 DFI_02135 DFI_02130 DFI_02130 DFI_12105 DFI_12105 DFI_12100 DFI_12100 DFI_12095 DFI_12095 DFI_08960 DFI_08960 DFI_16070 DFI_16070 DFI_16065 DFI_16065
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFI_02150Oxidoreductase. (332 aa)
DFI_02145RNA methyltransferase. (370 aa)
DFI_02140Potassium transporter KtrB. (485 aa)
DFI_02135Potassium transporter KtrB. (470 aa)
DFI_02130Potassium uptake system protein. (219 aa)
DFI_12105K+/H+ antiporter. (489 aa)
DFI_12100Potassium transporter TrkA. (174 aa)
DFI_12095Cation/H(+) antiporter. (383 aa)
DFI_08960Na_H_Exchanger domain-containing protein. (416 aa)
DFI_16070Ion_trans domain-containing protein. (269 aa)
DFI_16065Uncharacterized protein. (91 aa)
Your Current Organism:
Deinococcus ficus
NCBI taxonomy Id: 317577
Other names: CCUG 51391, CIP 108832, D. ficus, DSM 17424 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], DSM 19119, Deinococcus ficus Lai et al. 2006 emend. Kampfer 2009, Deinococcus mumbaiensis, Deinococcus mumbaiensis Shashidhar and Bandekar 2006, Deinococcus sp. 2009, Deinococcus sp. CC-FR2-10, Deinococcus sp. UK, MTCC 7297 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], strain CC-FR2-10, strain CON-1 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]]
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