STRINGSTRING
DFI_16820 DFI_16820 glgC glgC glmU glmU DFI_17790 DFI_17790 DFI_18035 DFI_18035 DFI_18150 DFI_18150 DFI_07940 DFI_07940 DFI_10500 DFI_10500 DFI_11095 DFI_11095 DFI_11680 DFI_11680 ispD ispD DFI_00335 DFI_00335 mobA mobA DFI_01845 DFI_01845 DFI_02565 DFI_02565 DFI_04425 DFI_04425 DFI_04955 DFI_04955
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFI_16820Glucose-1-phosphate thymidylyltransferase. (355 aa)
glgCGlucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (413 aa)
glmUGlucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (490 aa)
DFI_17790Glucose-1-phosphate thymidylyltransferase. (352 aa)
DFI_18035Glucose-1-phosphate cytidylyltransferase. (256 aa)
DFI_18150Uncharacterized protein. (313 aa)
DFI_07940Glycosyl transferase family 2. (223 aa)
DFI_10500Glucose-1-phosphate adenylyltransferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (442 aa)
DFI_11095Glycosyl transferase. (245 aa)
DFI_11680NTP_transf_3 domain-containing protein. (225 aa)
ispD2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). (231 aa)
DFI_00335Family 2 glycosyl transferase. (358 aa)
mobAProbable molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. (196 aa)
DFI_01845Nucleotide-diphospho-sugar transferase. (262 aa)
DFI_02565Glycosyl transferase. (437 aa)
DFI_04425Glycosyl transferase. (480 aa)
DFI_04955Nucleotidyl transferase. (345 aa)
Your Current Organism:
Deinococcus ficus
NCBI taxonomy Id: 317577
Other names: CCUG 51391, CIP 108832, D. ficus, DSM 17424 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], DSM 19119, Deinococcus ficus Lai et al. 2006 emend. Kampfer 2009, Deinococcus mumbaiensis, Deinococcus mumbaiensis Shashidhar and Bandekar 2006, Deinococcus sp. 2009, Deinococcus sp. CC-FR2-10, Deinococcus sp. UK, MTCC 7297 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], strain CC-FR2-10, strain CON-1 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]]
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