STRINGSTRING
rihB rihB DFI_05305 DFI_05305 DFI_04830 DFI_04830 DFI_04825 DFI_04825 surE surE DFI_00610 DFI_00610 DFI_00605 DFI_00605 nadA nadA DFI_12590 DFI_12590 DFI_11545 DFI_11545 DFI_11530 DFI_11530 cobB cobB DFI_09600 DFI_09600 DFI_08575 DFI_08575 rihB-2 rihB-2 DFI_06355 DFI_06355 DFI_06350 DFI_06350 nadE nadE DFI_17630 DFI_17630 gabD gabD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rihBRibonucleoside hydrolase. (317 aa)
DFI_05305Bifunctional metallophosphatase/5'-nucleotidase; Belongs to the 5'-nucleotidase family. (560 aa)
DFI_04830NAD(P)(+) transhydrogenase. (106 aa)
DFI_04825NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. (455 aa)
surE5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (265 aa)
DFI_00610L-aspartate oxidase. (514 aa)
DFI_00605Nicotinate-nucleotide diphosphorylase (Carboxylating); Belongs to the NadC/ModD family. (288 aa)
nadAQuinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (337 aa)
DFI_12590ADP-ribose pyrophosphatase. (352 aa)
DFI_11545Cytidyltransferase-like domain-containing protein. (330 aa)
DFI_11530Nicotinate phosphoribosyltransferase; Belongs to the NAPRTase family. (462 aa)
cobBNAD-dependent protein deacylase; Belongs to the sirtuin family. Class III subfamily. (245 aa)
DFI_09600Purine-nucleoside phosphorylase. (238 aa)
DFI_08575CinA-like protein; Belongs to the CinA family. (401 aa)
rihB-2Ribonucleoside hydrolase. (311 aa)
DFI_06355ADP-ribose pyrophosphatase. (305 aa)
DFI_06350Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. (487 aa)
nadENH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. (282 aa)
DFI_17630Multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase; Belongs to the 5'-nucleotidase family. (520 aa)
gabDNAD-dependent succinate-semialdehyde dehydrogenase. (482 aa)
Your Current Organism:
Deinococcus ficus
NCBI taxonomy Id: 317577
Other names: CCUG 51391, CIP 108832, D. ficus, DSM 17424 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], DSM 19119, Deinococcus ficus Lai et al. 2006 emend. Kampfer 2009, Deinococcus mumbaiensis, Deinococcus mumbaiensis Shashidhar and Bandekar 2006, Deinococcus sp. 2009, Deinococcus sp. CC-FR2-10, Deinococcus sp. UK, MTCC 7297 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]], strain CC-FR2-10, strain CON-1 [[Deinococcus mumbaiensis Shashidhar and Bandekar 2006]]
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