STRINGSTRING
Sala_0039 Sala_0039 Sala_0040 Sala_0040 Sala_0041 Sala_0041 Sala_0042 Sala_0042 Sala_0044 Sala_0044
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sala_0039Conserved hypothetical protein. (152 aa)
Sala_0040Protein of unknown function DUF526. (106 aa)
Sala_0041TspO and MBR like proteins. (183 aa)
Sala_0042Hemolysin A. (246 aa)
Sala_0044Type I phosphodiesterase/nucleotide pyrophosphatase; Alkaline phosphatase with broad substrate specificity. (561 aa)
Your Current Organism:
Sphingopyxis alaskensis
NCBI taxonomy Id: 317655
Other names: S. alaskensis RB2256, Sphingopyxis alaskensis RB2256, Sphingopyxis alaskensis str. RB2256, Sphingopyxis alaskensis strain RB2256
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.