STRINGSTRING
Sala_0426 Sala_0426 Sala_0427 Sala_0427 Sala_2489 Sala_2489 Sala_2490 Sala_2490 Sala_2491 Sala_2491 Sala_2496 Sala_2496 Sala_2521 Sala_2521 Sala_2633 Sala_2633 Sala_2663 Sala_2663 Sala_2664 Sala_2664 Sala_3154 Sala_3154
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sala_0426Hypothetical protein. (140 aa)
Sala_0427Antirestriction protein. (313 aa)
Sala_2489TrwC protein. (936 aa)
Sala_2490Type IV secretory pathway VirD4 components-like protein. (629 aa)
Sala_2491Hypothetical protein. (165 aa)
Sala_2496Conserved hypothetical protein. (169 aa)
Sala_2521Conserved hypothetical protein. (203 aa)
Sala_2633Protein of unknown function DUF736. (106 aa)
Sala_2663Conserved hypothetical protein. (135 aa)
Sala_2664Replication primases. (300 aa)
Sala_3154Conserved hypothetical protein. (188 aa)
Your Current Organism:
Sphingopyxis alaskensis
NCBI taxonomy Id: 317655
Other names: S. alaskensis RB2256, Sphingopyxis alaskensis RB2256, Sphingopyxis alaskensis str. RB2256, Sphingopyxis alaskensis strain RB2256
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.