STRINGSTRING
ABP73754.1 ABP73754.1 ABP73850.1 ABP73850.1 ABP73851.1 ABP73851.1 ABP73852.1 ABP73852.1 ABP74936.1 ABP74936.1 ABP74937.1 ABP74937.1 ABP74938.1 ABP74938.1 ABP74939.1 ABP74939.1 ABP74940.1 ABP74940.1 ABP74941.1 ABP74941.1 msrA msrA msrA-2 msrA-2 ABP76072.1 ABP76072.1 ABP76604.1 ABP76604.1 dsbD dsbD ABP77077.1 ABP77077.1 ABP77078.1 ABP77078.1 ABP77079.1 ABP77079.1 ABP77140.1 ABP77140.1 ABP77341.1 ABP77341.1 ABP77429.1 ABP77429.1 ABP77430.1 ABP77430.1 ABP77431.1 ABP77431.1 ABP77432.1 ABP77432.1 ABP77433.1 ABP77433.1 ccmA ccmA ABP77436.1 ABP77436.1 ccmC ccmC ABP77438.1 ABP77438.1 ccmE ccmE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABP73754.1PFAM: regulatory protein, ArsR; KEGG: shm:Shewmr7_0021 transcriptional regulator, ArsR family. (102 aa)
ABP73850.1PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: vpa:VP2006 putative suppressor for copper-sensitivity B precursor. (703 aa)
ABP73851.1PFAM: DSBA oxidoreductase; KEGG: vfi:VF2492 copper sensitivity protein ScsC. (274 aa)
ABP73852.1PFAM: Redoxin domain protein; KEGG: ppr:PBPRB1492 hypothetical thioredoxin. (174 aa)
ABP74936.1PFAM: YheO domain protein; KEGG: son:SO1402 hypothetical protein. (227 aa)
ABP74937.1PFAM: protein of unknown function DUF1063; KEGG: shm:Shewmr7_2876 protein of unknown function DUF1063; Belongs to the UPF0597 family. (424 aa)
ABP74938.1PFAM: regulatory protein, ArsR; KEGG: dps:DP0944 similar to ArsR-family transcription regulator. (102 aa)
ABP74939.1TIGRFAM: redox-active disulfide protein 2; KEGG: plt:Plut_1705 redox-active disulfide protein 2. (80 aa)
ABP74940.1KEGG: mhu:Mhun_0869 hypothetical protein. (162 aa)
ABP74941.1PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: bth:BT0800 hypothetical protein. (234 aa)
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (301 aa)
msrA-2Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (159 aa)
ABP76072.1TIGRFAM: Glutaredoxin, GrxA family; PFAM: glutaredoxin; KEGG: shm:Shewmr7_2436 glutaredoxin, GrxA family. (86 aa)
ABP76604.1Hypothetical protein. (115 aa)
dsbDProtein-disulfide reductase; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. (604 aa)
ABP77077.1TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO0478 cytochrome c-type biogenesis protein CcmF. (709 aa)
ABP77078.1Cytochrome C biogenesis protein; Possible subunit of a heme lyase. (139 aa)
ABP77079.1PFAM: Redoxin domain protein; KEGG: shm:Shewmr7_3545 redoxin domain protein. (194 aa)
ABP77140.1KEGG: shm:Shewmr7_3612 hypothetical protein. (178 aa)
ABP77341.1TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: son:SO0358 endoribonuclease L-PSP, putative. (127 aa)
ABP77429.1PFAM: Redoxin domain protein; KEGG: shm:Shewmr7_0232 redoxin domain protein. (195 aa)
ABP77430.1Cytochrome C biogenesis protein; Possible subunit of a heme lyase. (159 aa)
ABP77431.1TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; KEGG: son:SO0267 thiol:disulfide interchange protein DsbE. (184 aa)
ABP77432.1TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: shm:Shewmr7_0229 cytochrome c-type biogenesis protein CcmF. (659 aa)
ABP77433.1PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO0265 cytochrome c-type biogenesis protein CcmH. (415 aa)
ccmAHeme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (216 aa)
ABP77436.1Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. (228 aa)
ccmCHeme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. (248 aa)
ABP77438.1Heme exporter protein D (CcmD); Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. (66 aa)
ccmECcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. (162 aa)
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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