STRINGSTRING
ARN72375.1 ARN72375.1 ARN72400.1 ARN72400.1 ARN72487.1 ARN72487.1 ARN70607.1 ARN70607.1 ARN72491.1 ARN72491.1 ARN70373.1 ARN70373.1 ARN71399.1 ARN71399.1 gcvT gcvT ARN71290.1 ARN71290.1 ARN71284.1 ARN71284.1 ARN71231.1 ARN71231.1 ARN71200.1 ARN71200.1 ARN71127.1 ARN71127.1 ARN70987.1 ARN70987.1 ARN70929.1 ARN70929.1 ARN70928.1 ARN70928.1 murQ murQ ARN70867.1 ARN70867.1 ARN70801.1 ARN70801.1 ARN70762.1 ARN70762.1 ARN72538.1 ARN72538.1 ARN70748.1 ARN70748.1 ARN70656.1 ARN70656.1 ARN71600.1 ARN71600.1 ARN71651.1 ARN71651.1 ARN71656.1 ARN71656.1 ARN71657.1 ARN71657.1 ARN71666.1 ARN71666.1 ARN71668.1 ARN71668.1 ARN71669.1 ARN71669.1 ARN71670.1 ARN71670.1 ARN71704.1 ARN71704.1 ARN71752.1 ARN71752.1 ARN71842.1 ARN71842.1 gpmI gpmI ARN71881.1 ARN71881.1 dtd dtd ARN71945.1 ARN71945.1 gcvH gcvH ARN72020.1 ARN72020.1 ARN72613.1 ARN72613.1 ARN72126.1 ARN72126.1 ARN72327.1 ARN72327.1 ARN70269.1 ARN70269.1 kmo kmo kynU kynU ARN70295.1 ARN70295.1 ARN70347.1 ARN70347.1 ARN70357.1 ARN70357.1 hutI hutI ARN71463.1 ARN71463.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARN72375.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
ARN72400.1Dihydrolipoamide succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
ARN72487.1Tryptophan 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
ARN70607.1Fumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (431 aa)
ARN72491.1Homogentisate 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
ARN70373.1Arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)
ARN71399.1Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (402 aa)
gcvTGlycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. (360 aa)
ARN71290.1Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
ARN71284.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
ARN71231.1Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
ARN71200.1Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
ARN71127.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (457 aa)
ARN70987.1Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
ARN70929.1Glycine dehydrogenase (aminomethyl-transferring); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvP family. (945 aa)
ARN70928.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (362 aa)
murQN-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. (271 aa)
ARN70867.1Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (705 aa)
ARN70801.1Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
ARN70762.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (985 aa)
ARN72538.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)
ARN70748.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
ARN70656.1MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
ARN71600.12-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
ARN71651.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
ARN71656.1Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (404 aa)
ARN71657.13-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
ARN71666.12-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
ARN71668.1phenylacetate-CoA oxygenase subunit PaaI; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
ARN71669.1phenylacetate-CoA oxygenase subunit PaaB; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
ARN71670.11,2-phenylacetyl-CoA epoxidase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
ARN71704.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
ARN71752.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)
ARN71842.12-hydroxymuconic semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (482 aa)
gpmIPhosphoglycerate mutase (2,3-diphosphoglycerate-independent); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (504 aa)
ARN71881.1Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (161 aa)
dtdD-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (164 aa)
ARN71945.1Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family. (219 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (125 aa)
ARN72020.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
ARN72613.1Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
ARN72126.1Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (517 aa)
ARN72327.1MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
ARN70269.11-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)
kmoKynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. (465 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (420 aa)
ARN70295.1anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. (350 aa)
ARN70347.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (487 aa)
ARN70357.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
hutIImidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
ARN71463.1Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
Your Current Organism:
Nonlabens sediminis
NCBI taxonomy Id: 319236
Other names: Flavobacteriaceae bacterium JCM 19294, LMG 23247, LMG:23247, N. sediminis, NBRC 100970, Nonlabens sediminis (Khan et al. 2006) Yi and Chun 2012, Sandarakinotalea sediminis, Sandarakinotalea sediminis Khan et al. 2006, strain CKA-5
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