STRINGSTRING
ARN72526.1 ARN72526.1 ARN70570.1 ARN70570.1 ARN70670.1 ARN70670.1 ARN71034.1 ARN71034.1 ARN71085.1 ARN71085.1 lpxC lpxC ARN72577.1 ARN72577.1 ARN71513.1 ARN71513.1 ARN71552.1 ARN71552.1 ARN71653.1 ARN71653.1 ARN71659.1 ARN71659.1 ARN72129.1 ARN72129.1 ARN72382.1 ARN72382.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARN72526.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
ARN70570.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
ARN70670.1acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
ARN71034.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
ARN71085.1acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
lpxCUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. (466 aa)
ARN72577.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
ARN71513.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
ARN71552.1acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
ARN71653.1Phenylacetic acid degradation bifunctional protein PaaZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (845 aa)
ARN71659.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
ARN72129.1acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
ARN72382.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
Your Current Organism:
Nonlabens sediminis
NCBI taxonomy Id: 319236
Other names: Flavobacteriaceae bacterium JCM 19294, LMG 23247, LMG:23247, N. sediminis, NBRC 100970, Nonlabens sediminis (Khan et al. 2006) Yi and Chun 2012, Sandarakinotalea sediminis, Sandarakinotalea sediminis Khan et al. 2006, strain CKA-5
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