STRINGSTRING
Dgeo_1751 Dgeo_1751 Dgeo_1752 Dgeo_1752 Dgeo_1753 Dgeo_1753 Dgeo_1754 Dgeo_1754 Dgeo_1755 Dgeo_1755 Dgeo_1756 Dgeo_1756 Dgeo_1757 Dgeo_1757 Dgeo_1758 Dgeo_1758
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dgeo_1751KEGG: dra:DR0459 hypothetical protein, ev=6e-96, 74% identity. (235 aa)
Dgeo_1752KEGG: dra:DR0458 hypothetical protein, ev=4e-82, 36% identity. (636 aa)
Dgeo_1753PFAM: Biopolymer transport protein ExbD/TolR: (3.5e-21); KEGG: dra:DR0457 biopolymer transport protein, putative, ev=2e-49, 72% identity; TC 2.C.1.1.1. (138 aa)
Dgeo_1754PFAM: MotA/TolQ/ExbB proton channel: (2.7e-19); KEGG: dra:DR0456 biopolymer transport protein, putative, ev=4e-75, 70% identity. (230 aa)
Dgeo_1755Glycosyltransferase, NfrB-like protein; KEGG: ecs:ECs0601 NfrB, ev=4e-58, 31% identity. (670 aa)
Dgeo_1756Endoglucanase, family 26; KEGG: mta:Moth_2139 beta-mannanase-like, ev=4e-20, 30% identity; Belongs to the glycosyl hydrolase 26 family. (358 aa)
Dgeo_1757KEGG: rso:RS00391 hypothetical protein, ev=1e-55, 30% identity. (575 aa)
Dgeo_1758PFAM: aminotransferase, class I and II: (1.6e-45); KEGG: dra:DR2268 putative aminotransferase, ev=1e-176, 80% identity. (391 aa)
Your Current Organism:
Deinococcus geothermalis
NCBI taxonomy Id: 319795
Other names: D. geothermalis DSM 11300, Deinococcus geothermalis AG-3a, Deinococcus geothermalis CIP 105573, Deinococcus geothermalis DSM 11300, Deinococcus geothermalis str. DSM 11300, Deinococcus geothermalis strain DSM 11300
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