STRINGSTRING
Dgeo_1501 Dgeo_1501 Dgeo_1502 Dgeo_1502 Dgeo_1500 Dgeo_1500 Dgeo_1168 Dgeo_1168 Dgeo_1027 Dgeo_1027 Dgeo_0906 Dgeo_0906 Dgeo_0750 Dgeo_0750 Dgeo_0590 Dgeo_0590
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dgeo_1501Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (2.1e-13); KEGG: dra:DR0562 maltose transport system permease protein, ev=0.0, 72% identity; TC 3.A.1.1.-. (474 aa)
Dgeo_1502Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (1.1e-19); KEGG: dra:DR0563 maltose transport system permease protein, ev=0.0, 76% identity; TC 3.A.1.1.-. (458 aa)
Dgeo_1500Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1: (1.3e-32); KEGG: dra:DR0561 maltose transport system substrate-binding protein, ev=1e-166, 70% identity; TC 3.A.1.1.-. (393 aa)
Dgeo_1168Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (3.2e-11); KEGG: cvi:CV2898 probable sugar ABC transporter permease protein, ev=9e-84, 53% identity; TC 3.A.1.1.-. (310 aa)
Dgeo_1027KEGG: dra:DR1322 conserved hypothetical protein, ev=2e-52, 69% identity. (160 aa)
Dgeo_0906Glucose ABC transporter membrane protein / mannose ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component: (2.2e-11); KEGG: tth:TTC0327 glucose transport system permease protein, ev=1e-127, 60% identity. (383 aa)
Dgeo_0750Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (0.0033); KEGG: sme:SMa1363 putative ABC transporter, permease protein, ev=7e-78, 45% identity; TC 3.A.1.1.-. (366 aa)
Dgeo_0590PFAM: binding-protein-dependent transport systems inner membrane component: (2.2e-09); KEGG: dra:DR1437 putative multiple sugar transport system permease protein, ev=1e-153, 84% identity. (315 aa)
Your Current Organism:
Deinococcus geothermalis
NCBI taxonomy Id: 319795
Other names: D. geothermalis DSM 11300, Deinococcus geothermalis AG-3a, Deinococcus geothermalis CIP 105573, Deinococcus geothermalis DSM 11300, Deinococcus geothermalis str. DSM 11300, Deinococcus geothermalis strain DSM 11300
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