STRINGSTRING
Dgeo_0048 Dgeo_0048 Dgeo_0049 Dgeo_0049 Dgeo_0101 Dgeo_0101 Dgeo_0102 Dgeo_0102 dacA dacA crcB1 crcB1 Dgeo_0150 Dgeo_0150 Dgeo_0174 Dgeo_0174 Dgeo_0229 Dgeo_0229 mscL mscL Dgeo_0362 Dgeo_0362 Dgeo_0382 Dgeo_0382 Dgeo_0398 Dgeo_0398 Dgeo_0471 Dgeo_0471 Dgeo_0533 Dgeo_0533 Dgeo_0587 Dgeo_0587 Dgeo_0589 Dgeo_0589 Dgeo_0590 Dgeo_0590 Dgeo_0659 Dgeo_0659 Dgeo_0671 Dgeo_0671 Dgeo_0749 Dgeo_0749 Dgeo_0750 Dgeo_0750 Dgeo_0857 Dgeo_0857 Dgeo_0901 Dgeo_0901 Dgeo_0906 Dgeo_0906 Dgeo_0907 Dgeo_0907 uppP uppP Dgeo_1059 Dgeo_1059 lnt lnt Dgeo_1158 Dgeo_1158 Dgeo_1168 Dgeo_1168 Dgeo_1169 Dgeo_1169 Dgeo_1170 Dgeo_1170 Dgeo_1183 Dgeo_1183 Dgeo_1197 Dgeo_1197 Dgeo_1200 Dgeo_1200 Dgeo_1374 Dgeo_1374 Dgeo_1412 Dgeo_1412 Dgeo_1452 Dgeo_1452 Dgeo_1500 Dgeo_1500 Dgeo_1501 Dgeo_1501 Dgeo_1502 Dgeo_1502 Dgeo_1524 Dgeo_1524 Dgeo_1583 Dgeo_1583 Dgeo_1584 Dgeo_1584 Dgeo_1736 Dgeo_1736 Dgeo_1760 Dgeo_1760 Dgeo_1812 Dgeo_1812 Dgeo_1938 Dgeo_1938 Dgeo_1958 Dgeo_1958 lgt lgt argH argH Dgeo_2118 Dgeo_2118 Dgeo_2181 Dgeo_2181 Dgeo_2211 Dgeo_2211 Dgeo_2244 Dgeo_2244
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dgeo_0048PFAM: permease YjgP/YjgQ: (6.9e-47); KEGG: dra:DR2430 hypothetical protein, ev=1e-108, 56% identity. (352 aa)
Dgeo_0049PFAM: permease YjgP/YjgQ: (2.9e-60); KEGG: dra:DR2431 hypothetical protein, ev=1e-132, 69% identity. (367 aa)
Dgeo_0101PFAM: deoxynucleoside kinase: (1.2e-39); KEGG: dra:DR0298 deoxyguanosine kinase/deoxyadenosine kinase subunit, ev=2e-99, 83% identity. (207 aa)
Dgeo_0102PFAM: deoxynucleoside kinase: (8.5e-18); KEGG: dra:DR0299 deoxyguanosine kinase/deoxyadenosine kinase subunit, ev=2e-74, 72% identity. (205 aa)
dacAProtein of unknown function DUF147; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (278 aa)
crcB1crcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (126 aa)
Dgeo_0150PFAM: Mg2+ transporter protein, CorA-like: (2.8e-30); KEGG: dra:DR2399 hypothetical protein, ev=1e-89, 72% identity. (345 aa)
Dgeo_0174ABC-type proline/glycine/betaine transport system, periplasmic component; PFAM: Substrate-binding region of ABC-type glycine betaine transport system: (3.9e-71); KEGG: cvi:CV4392 probable ABC transporter, ev=7e-75, 51% identity. (300 aa)
Dgeo_0229PFAM: protein phosphatase 2C-like: (3.5e-07); KEGG: dra:DR2513 hypothetical protein, ev=1e-117, 66% identity. (348 aa)
mscLLarge conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. (131 aa)
Dgeo_0362PFAM: Mg2+ transporter protein, CorA-like: (8.2e-15); KEGG: mta:Moth_0267 magnesium and cobalt transport protein CorA, ev=1e-25, 25% identity. (355 aa)
Dgeo_0382ABC-type transport system, permease component; KEGG: dra:DR2315 hypothetical protein, ev=1e-106, 67% identity. (290 aa)
Dgeo_0398KEGG: dra:DR0170 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase, ev=3e-54, 69% identity; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase: (1.8e-50); PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK: (1e-47). (163 aa)
Dgeo_0471PFAM: protein of unknown function DUF1211: (1e-40); KEGG: cvi:CV0104 hypothetical protein, ev=3e-58, 55% identity. (203 aa)
Dgeo_0533ABC-type Mn2+ transport system, ATPase component; PFAM: ABC transporter related: (2.4e-52); SMART: ATPase: (2.4e-16); KEGG: dra:DR2284 manganese transport system ATP-binding protein, ev=9e-96, 72% identity. (255 aa)
Dgeo_0587ABC-type transport system, ATPase component; PFAM: ABC transporter related: (5.4e-65); SMART: ATPase: (3.4e-13); KEGG: dra:DR2134 ABC transporter, ATP-binding protein, ev=1e-125, 88% identity. (256 aa)
Dgeo_0589PFAM: binding-protein-dependent transport systems inner membrane component: (1.1e-22); KEGG: dra:DR1436 putative multiple sugar transport system permease protein, ev=1e-129, 82% identity. (283 aa)
Dgeo_0590PFAM: binding-protein-dependent transport systems inner membrane component: (2.2e-09); KEGG: dra:DR1437 putative multiple sugar transport system permease protein, ev=1e-153, 84% identity. (315 aa)
Dgeo_0659Chloride channel protein, EriC; PFAM: Cl- channel, voltage gated: (2.3e-07) TrkA-C: (6.9e-09); KEGG: dra:DR1752 hypothetical protein, ev=0.0, 63% identity. (543 aa)
Dgeo_0671PFAM: membrane protein of unknown function: (1.7e-50); KEGG: dra:DR1165 hypothetical protein, ev=2e-48, 79% identity. (122 aa)
Dgeo_0749Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (8.2e-13); KEGG: sme:SMa1362 putative inner-membrane permease, ev=2e-80, 37% identity; TC 3.A.1.1.-. (514 aa)
Dgeo_0750Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (0.0033); KEGG: sme:SMa1363 putative ABC transporter, permease protein, ev=7e-78, 45% identity; TC 3.A.1.1.-. (366 aa)
Dgeo_0857TIGRFAM: Lycopene cyclase, beta and epsilon: (5.7e-141); PFAM: Lycopene beta and epsilon cyclase: (2.9e-45); KEGG: dra:DR0801 lycopene cyclase, ev=1e-130, 61% identity. (435 aa)
Dgeo_0901PFAM: major facilitator superfamily MFS_1: (6.7e-15); KEGG: dra:DR1971 hypothetical protein, ev=5e-93, 52% identity. (376 aa)
Dgeo_0906Glucose ABC transporter membrane protein / mannose ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component: (2.2e-11); KEGG: tth:TTC0327 glucose transport system permease protein, ev=1e-127, 60% identity. (383 aa)
Dgeo_0907PFAM: binding-protein-dependent transport systems inner membrane component: (5.7e-19); KEGG: ttj:TTHA0685 sugar ABC transporter, permease protein, ev=1e-108, 71% identity. (287 aa)
uppPUndecaprenol kinase, putative; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (274 aa)
Dgeo_1059Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related: (2.4e-57) TOBE: (6.6e-15) Transport-associated OB: (9.6e-13); SMART: ATPase: (1.1e-16); KEGG: dra:DR2153 putative polar amino acid transport system ATP-binding protein, ev=0.0, 82% identity; TC 3.A.1.1.-. (402 aa)
lntApolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. (498 aa)
Dgeo_1158Potassium/proton antiporter membrane subunit, CPA2 family; PFAM: sodium/hydrogen exchanger: (6.1e-67); KEGG: dra:DR1149 Na+/H+ antiporter, putative, ev=1e-161, 77% identity; TC 2.A.37.5.2. (388 aa)
Dgeo_1168Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (3.2e-11); KEGG: cvi:CV2898 probable sugar ABC transporter permease protein, ev=9e-84, 53% identity; TC 3.A.1.1.-. (310 aa)
Dgeo_1169Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (3.5e-13); KEGG: cvi:CV0260 probable ABC transporter sugar permease, ev=5e-63, 45% identity; TC 3.A.1.1.-. (306 aa)
Dgeo_11702-oxoacid dehydrogenase; KEGG: bcl:ABC3582 hypothetical protein, ev=2e-59, 35% identity. (457 aa)
Dgeo_1183PFAM: permease YjgP/YjgQ: (1.3e-63); KEGG: dra:DR1075 hypothetical protein, ev=1e-170, 80% identity. (381 aa)
Dgeo_1197PFAM: protein of unknown function DUF6, transmembrane: (3.4e-16); KEGG: dra:DR1295 PecM-related protein, ev=1e-110, 73% identity. (295 aa)
Dgeo_1200PFAM: protein of unknown function DUF1622: (1.5e-28); KEGG: dra:DR1328 hypothetical protein, ev=3e-24, 56% identity. (138 aa)
Dgeo_1374Nucleoside ABC transporter ATP-binding protein; PFAM: ABC transporter related: (9.7e-17); SMART: ATPase: (0.0042); KEGG: dra:DR0957 sugar ABC transporter, ATP-binding protein, ev=0.0, 84% identity. (533 aa)
Dgeo_1412ABC transporter, permease, aliphatic sulfonate; PFAM: binding-protein-dependent transport systems inner membrane component: (8.4e-14); KEGG: dra:DR2197 putative sulfonate transport system permease protein, ev=1e-117, 77% identity. (277 aa)
Dgeo_1452Hypothetical protein; KEGG: sma:SAV2972 putative 2-oxoglutarate dehydrogenase, ev=6e-06, 31% identity. (459 aa)
Dgeo_1500Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1: (1.3e-32); KEGG: dra:DR0561 maltose transport system substrate-binding protein, ev=1e-166, 70% identity; TC 3.A.1.1.-. (393 aa)
Dgeo_1501Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (2.1e-13); KEGG: dra:DR0562 maltose transport system permease protein, ev=0.0, 72% identity; TC 3.A.1.1.-. (474 aa)
Dgeo_1502Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (1.1e-19); KEGG: dra:DR0563 maltose transport system permease protein, ev=0.0, 76% identity; TC 3.A.1.1.-. (458 aa)
Dgeo_1524KEGG: dra:DR0738 hypothetical protein, ev=2e-66, 44% identity. (347 aa)
Dgeo_1583TIGRFAM: K+ transporter Trk: (1.6e-150); PFAM: cation transporter: (2.9e-81); KEGG: dra:DR1668 potassium uptake protein KtrB, ev=1e-155, 60% identity. (458 aa)
Dgeo_1584K+ transport system, NAD-binding component; PFAM: TrkA-N: (2.2e-38) TrkA-C: (1.4e-11) NAD-dependent glycerol-3-phosphate dehydrogenase-like: (0.00032); KEGG: dra:DR1666 potassium uptake protein KtrA, ev=1e-108, 92% identity. (219 aa)
Dgeo_1736ABC-type transport system, ATPase component/photorepair protein PhrA; PFAM: ABC transporter related: (2.2e-32); SMART: ATPase: (1.4e-13); KEGG: dra:DR2145 ABC transporter, ATP-binding protein, ev=5e-85, 66% identity. (483 aa)
Dgeo_1760TIGRFAM: SSS sodium solute transporter superfamily: (1.3e-74); PFAM: Na+/solute symporter: (1.3e-119); KEGG: dra:DR0477 sodium:solute symporter protein, ev=0.0, 81% identity; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (530 aa)
Dgeo_1812ABC-type transport system, permease component; KEGG: dra:DR1013 putative ABC-2 type transport system permease protein, ev=2e-93, 68% identity. (257 aa)
Dgeo_1938ABC-type polyamine transport system, ATPase component; PFAM: ABC transporter related: (1.5e-63); SMART: ATPase: (6.2e-19); KEGG: dra:DR0062 ABC transporter, ATP-binding protein, ev=1e-110, 67% identity. (325 aa)
Dgeo_1958TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine: (5.5e-33); PFAM: binding-protein-dependent transport systems inner membrane component: (9.9e-32); KEGG: dra:DR2277 polar amino acid transport system permease protein, ev=6e-99, 81% identity; TC 3.A.1.3.-. (231 aa)
lgtProlipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. (303 aa)
argHTIGRFAM: argininosuccinate lyase: (4.4e-244); PFAM: fumarate lyase: (6e-85); KEGG: dra:DR0678 argininosuccinate lyase, ev=0.0, 87% identity. (465 aa)
Dgeo_2118KEGG: dra:DR0738 hypothetical protein, ev=1e-128, 74% identity. (345 aa)
Dgeo_2181PFAM: protein of unknown function DUF1452: (3.5e-16); KEGG: nwi:Nwi_1145 protein of unknown function DUF1452, ev=3e-17, 55% identity. (85 aa)
Dgeo_2211PFAM: Mg2+ transporter protein, CorA-like: (2.6e-05); KEGG: dra:DR2463 transport protein, putative, ev=1e-144, 83% identity. (310 aa)
Dgeo_2244PFAM: major facilitator superfamily MFS_1: (1.4e-20); KEGG: dra:DR2502 transport protein, putative, ev=1e-146, 71% identity. (400 aa)
Your Current Organism:
Deinococcus geothermalis
NCBI taxonomy Id: 319795
Other names: D. geothermalis DSM 11300, Deinococcus geothermalis AG-3a, Deinococcus geothermalis CIP 105573, Deinococcus geothermalis DSM 11300, Deinococcus geothermalis str. DSM 11300, Deinococcus geothermalis strain DSM 11300
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