STRINGSTRING
Dgeo_1500 Dgeo_1500 Dgeo_1501 Dgeo_1501 Dgeo_1736 Dgeo_1736 Dgeo_1938 Dgeo_1938 Dgeo_1958 Dgeo_1958 Dgeo_1168 Dgeo_1168 Dgeo_1059 Dgeo_1059 Dgeo_0907 Dgeo_0907 Dgeo_0906 Dgeo_0906 Dgeo_0750 Dgeo_0750 Dgeo_0749 Dgeo_0749 Dgeo_0590 Dgeo_0590 Dgeo_0589 Dgeo_0589 Dgeo_0587 Dgeo_0587 Dgeo_0533 Dgeo_0533 Dgeo_0174 Dgeo_0174 Dgeo_0049 Dgeo_0049 Dgeo_0048 Dgeo_0048 Dgeo_1169 Dgeo_1169 Dgeo_1183 Dgeo_1183 Dgeo_1374 Dgeo_1374
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dgeo_1500Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1: (1.3e-32); KEGG: dra:DR0561 maltose transport system substrate-binding protein, ev=1e-166, 70% identity; TC 3.A.1.1.-. (393 aa)
Dgeo_1501Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (2.1e-13); KEGG: dra:DR0562 maltose transport system permease protein, ev=0.0, 72% identity; TC 3.A.1.1.-. (474 aa)
Dgeo_1736ABC-type transport system, ATPase component/photorepair protein PhrA; PFAM: ABC transporter related: (2.2e-32); SMART: ATPase: (1.4e-13); KEGG: dra:DR2145 ABC transporter, ATP-binding protein, ev=5e-85, 66% identity. (483 aa)
Dgeo_1938ABC-type polyamine transport system, ATPase component; PFAM: ABC transporter related: (1.5e-63); SMART: ATPase: (6.2e-19); KEGG: dra:DR0062 ABC transporter, ATP-binding protein, ev=1e-110, 67% identity. (325 aa)
Dgeo_1958TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine: (5.5e-33); PFAM: binding-protein-dependent transport systems inner membrane component: (9.9e-32); KEGG: dra:DR2277 polar amino acid transport system permease protein, ev=6e-99, 81% identity; TC 3.A.1.3.-. (231 aa)
Dgeo_1168Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (3.2e-11); KEGG: cvi:CV2898 probable sugar ABC transporter permease protein, ev=9e-84, 53% identity; TC 3.A.1.1.-. (310 aa)
Dgeo_1059Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related: (2.4e-57) TOBE: (6.6e-15) Transport-associated OB: (9.6e-13); SMART: ATPase: (1.1e-16); KEGG: dra:DR2153 putative polar amino acid transport system ATP-binding protein, ev=0.0, 82% identity; TC 3.A.1.1.-. (402 aa)
Dgeo_0907PFAM: binding-protein-dependent transport systems inner membrane component: (5.7e-19); KEGG: ttj:TTHA0685 sugar ABC transporter, permease protein, ev=1e-108, 71% identity. (287 aa)
Dgeo_0906Glucose ABC transporter membrane protein / mannose ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component: (2.2e-11); KEGG: tth:TTC0327 glucose transport system permease protein, ev=1e-127, 60% identity. (383 aa)
Dgeo_0750Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (0.0033); KEGG: sme:SMa1363 putative ABC transporter, permease protein, ev=7e-78, 45% identity; TC 3.A.1.1.-. (366 aa)
Dgeo_0749Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (8.2e-13); KEGG: sme:SMa1362 putative inner-membrane permease, ev=2e-80, 37% identity; TC 3.A.1.1.-. (514 aa)
Dgeo_0590PFAM: binding-protein-dependent transport systems inner membrane component: (2.2e-09); KEGG: dra:DR1437 putative multiple sugar transport system permease protein, ev=1e-153, 84% identity. (315 aa)
Dgeo_0589PFAM: binding-protein-dependent transport systems inner membrane component: (1.1e-22); KEGG: dra:DR1436 putative multiple sugar transport system permease protein, ev=1e-129, 82% identity. (283 aa)
Dgeo_0587ABC-type transport system, ATPase component; PFAM: ABC transporter related: (5.4e-65); SMART: ATPase: (3.4e-13); KEGG: dra:DR2134 ABC transporter, ATP-binding protein, ev=1e-125, 88% identity. (256 aa)
Dgeo_0533ABC-type Mn2+ transport system, ATPase component; PFAM: ABC transporter related: (2.4e-52); SMART: ATPase: (2.4e-16); KEGG: dra:DR2284 manganese transport system ATP-binding protein, ev=9e-96, 72% identity. (255 aa)
Dgeo_0174ABC-type proline/glycine/betaine transport system, periplasmic component; PFAM: Substrate-binding region of ABC-type glycine betaine transport system: (3.9e-71); KEGG: cvi:CV4392 probable ABC transporter, ev=7e-75, 51% identity. (300 aa)
Dgeo_0049PFAM: permease YjgP/YjgQ: (2.9e-60); KEGG: dra:DR2431 hypothetical protein, ev=1e-132, 69% identity. (367 aa)
Dgeo_0048PFAM: permease YjgP/YjgQ: (6.9e-47); KEGG: dra:DR2430 hypothetical protein, ev=1e-108, 56% identity. (352 aa)
Dgeo_1169Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component: (3.5e-13); KEGG: cvi:CV0260 probable ABC transporter sugar permease, ev=5e-63, 45% identity; TC 3.A.1.1.-. (306 aa)
Dgeo_1183PFAM: permease YjgP/YjgQ: (1.3e-63); KEGG: dra:DR1075 hypothetical protein, ev=1e-170, 80% identity. (381 aa)
Dgeo_1374Nucleoside ABC transporter ATP-binding protein; PFAM: ABC transporter related: (9.7e-17); SMART: ATPase: (0.0042); KEGG: dra:DR0957 sugar ABC transporter, ATP-binding protein, ev=0.0, 84% identity. (533 aa)
Your Current Organism:
Deinococcus geothermalis
NCBI taxonomy Id: 319795
Other names: D. geothermalis DSM 11300, Deinococcus geothermalis AG-3a, Deinococcus geothermalis CIP 105573, Deinococcus geothermalis DSM 11300, Deinococcus geothermalis str. DSM 11300, Deinococcus geothermalis strain DSM 11300
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