STRINGSTRING
SFA39579.1 SFA39579.1 SFA43429.1 SFA43429.1 SFA48140.1 SFA48140.1 SFA57144.1 SFA57144.1 SFA61032.1 SFA61032.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFA39579.1LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family. (311 aa)
SFA43429.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (304 aa)
SFA48140.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (292 aa)
SFA57144.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (302 aa)
SFA61032.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (296 aa)
Your Current Organism:
Pseudomonas otitidis
NCBI taxonomy Id: 319939
Other names: DSM 17224, P. otitidis, Pseudomonas otitidis Clark et al. 2006, strain MCC10330
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