49 items (Achromobacter denitrificans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OLU10116.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
	OLU10117.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (350 aa)
	OLU10118.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	OLU10119.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	OLU10120.1	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
	OLU10122.1	FAD/NAD(P)-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
	OLU10123.1	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
	OLU10124.1	RidA/YER057c/UK114 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
	OLU08977.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (591 aa)
	potA	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (362 aa)
	OLU08979.1	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
	OLU08980.1	Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)
	OLU08794.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
	potA-2	Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (366 aa)
	OLU08796.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	OLU08797.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	OLU08347.1	3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family. (229 aa)
	OLU08311.1	Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family. (118 aa)
	OLU08312.1	Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
	OLU08313.1	Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	potA-3	Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (375 aa)
	OLU08315.1	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (367 aa)
	OLU08348.1	Hemoglobin-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
	OLU08317.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (837 aa)
	OLU06910.1	Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
	OLU06911.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (350 aa)
	OLU06912.1	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
	OLU06913.1	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
	OLU06760.1	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)
	OLU06761.1	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
	OLU06785.1	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
	OLU06762.1	AMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)
	OLU06763.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)
	OLU06764.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (363 aa)
	OLU06765.1	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
	OLU06409.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (366 aa)
	OLU06410.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
	OLU06411.1	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	OLU06412.1	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)
	OLU06413.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
	OLU01000.1	Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family. (460 aa)
	OLU01001.1	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
	OLU01002.1	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
	OLU01003.1	Ribulose phosphate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
	OLU01004.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
	OLU01005.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
	OLU01006.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (363 aa)
	OLU01007.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
	OLT99781.1	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (357 aa)

Your Current Organism:

Achromobacter denitrificans

NCBI taxonomy Id: 32002
Other names: A. denitrificans, ATCC 15173, Achromobacter xylosoxidans subsp. denitrificans, Alcaligenes denitrificans, Alcaligenes denitrificans denitrificans, Alcaligenes denitrificans subsp. denitrificans, Alcaligenes xylosoxidans subsp. denitrificans, Alcaligenes xylosoxydans denitrificans, CCUG 407, CIP 77.15, DSM 30026, IFO 15125, JCM 5490, JCM 9657, NBRC 15125, NCTC 8582

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OLT99781.1	OLU01004.1	BVK87_30055	BVK87_28410	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.791
OLT99781.1	OLU01005.1	BVK87_30055	BVK87_28415	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
OLT99781.1	OLU01007.1	BVK87_30055	BVK87_28425	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
OLT99781.1	OLU06410.1	BVK87_30055	BVK87_20635	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.786
OLT99781.1	OLU06411.1	BVK87_30055	BVK87_20640	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.746
OLT99781.1	OLU06761.1	BVK87_30055	BVK87_18700	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
OLT99781.1	OLU06785.1	BVK87_30055	BVK87_18705	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
OLT99781.1	OLU06910.1	BVK87_30055	BVK87_17815	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.521
OLT99781.1	OLU06912.1	BVK87_30055	BVK87_17825	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.811
OLT99781.1	OLU06913.1	BVK87_30055	BVK87_17830	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
OLT99781.1	OLU08312.1	BVK87_30055	BVK87_10785	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683
OLT99781.1	OLU08313.1	BVK87_30055	BVK87_10790	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.689
OLT99781.1	OLU08315.1	BVK87_30055	BVK87_10800	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.479
OLT99781.1	OLU08796.1	BVK87_30055	BVK87_08085	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.755
OLT99781.1	OLU08797.1	BVK87_30055	BVK87_08090	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.742
OLT99781.1	OLU08977.1	BVK87_30055	BVK87_07180	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.848
OLT99781.1	OLU10118.1	BVK87_30055	BVK87_01420	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
OLT99781.1	OLU10119.1	BVK87_30055	BVK87_01425	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
OLU01000.1	OLU01001.1	BVK87_28390	BVK87_28395	Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.720
OLU01000.1	OLU01002.1	BVK87_28390	BVK87_28400	Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.613

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