STRINGSTRING
petJ petJ petF petF petH petH petF-3 petF-3 petJ-2 petJ-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
petJCytochrome c6 precursor (Cytochrome c553); Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis. (117 aa)
petFFerredoxin [2Fe-2S] II; Similar to gene sll1382 of Synechocystis sp. PCC 6803. (122 aa)
petHferredoxin-NADP reductase; Similar to gene slr1643 of Synechocystis sp. PCC 6803. (402 aa)
petF-3Ferredoxin; Similar to ssl0020 of Synechocystis sp. PCC 6803. (97 aa)
petJ-2Cytochrome c6; Similar to all0161 of Nostoc sp. strain PCC 7120. (115 aa)
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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