STRINGSTRING
lpxB lpxB lpxA lpxA slt slt ACA98328.1 ACA98328.1 lpxC lpxC lpxB-2 lpxB-2 ACA98774.1 ACA98774.1 ACA98775.1 ACA98775.1 ACA98787.1 ACA98787.1 lpxD lpxD ACA99024.1 ACA99024.1 ACA99560.1 ACA99560.1 sll0832 sll0832 sll1424 sll1424 ACA99841.1 ACA99841.1 ACA99842.1 ACA99842.1 ACA99843.1 ACA99843.1 ACB00170.1 ACB00170.1 ACB00405.1 ACB00405.1 ACB00684.1 ACB00684.1 ACB00782.1 ACB00782.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lpxBlipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (390 aa)
lpxAacyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (265 aa)
sltSoluble lytic transglycosylase; Similar to slr0534 of Synechococystis sp. PCC 6803. (717 aa)
ACA98328.1Outer membrane protein, OMP85 family; Similar to slr1227 of Synechocystis sp. PCC 6803. (723 aa)
lpxCUDP-3-0-acyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (275 aa)
lpxB-2Lipid A disaccharide synthetase; Similar to slr1677 of Synechocystis sp. PCC 6803. (420 aa)
ACA98774.1ABC-type transport protein; Similar to gene slr0251 of Synechocystis sp. strain PCC 6803. (247 aa)
ACA98775.1Conserved hypothetical protein; Similar to slr0250 of Synechocystis sp. PCC 6803. (155 aa)
ACA98787.1Conserved hypothetical protein; Similar to slr1841 of Synechocystis sp. PCC 6803; Belongs to the OprB family. (536 aa)
lpxDUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (341 aa)
ACA99024.1Putative permease, YjgP/YjgQ family superfamily; Similar to slr0882 in Synechocystis sp. PCC 6803. (378 aa)
ACA99560.1Peptidase family M48 family; Similar to slr1971 in Synechocystis sp. PCC 6803. (289 aa)
sll0832Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. (133 aa)
sll1424Conserved hypothetical protein; Similar to sll1424 in Synechocystis sp. PCC 6803. (456 aa)
ACA99841.1Conserved hypothetical protein; Similar to sll0192 of Synechocystis sp. PCC 6803. (412 aa)
ACA99842.1Conserved hypothetical protein (UPF0227); Similar to all4967 of Nostoc sp. PCC 7120. (206 aa)
ACA99843.1Conserved hypothetical protein (DUF820); Similar to alr1460 of Nostoc sp. PCC 7120. (195 aa)
ACB00170.1ABC transporter family protein; Similar to sll1276 of Synechocystis sp. PCC 6803. (576 aa)
ACB00405.1Permease, YjgP/YjgQ family protein; Similar to slr0882 of Synechocystis sp. PCC 6803. (373 aa)
ACB00684.1Conserved hypothetical protein; Similar to slr0872 of Synechocystis sp. PCC 6803. (362 aa)
ACB00782.1S-layer like protein; Similar to slr1841 of Synechocystis sp. PCC 6803; Belongs to the OprB family. (570 aa)
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.