(12 nodes) Mixed, incl. Fusaric acid resistance protein-like, and Cytolysis network (Synechococcus sp. WH 7803)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAK22735.1	Uncharacterized conserved secreted protein. (1074 aa)
	CAK23129.1	Conserved hypothetical protein. (187 aa)
	CAK23153.1	Uncharacterized conserved membrane protein. (144 aa)
	CAK23188.1	Conserved hypothetical protein. (1476 aa)
	CAK23553.1	Uncharacterized conserved secreted protein. (395 aa)
	CAK23604.1	Porin homolog; Belongs to the OprB family. (489 aa)
	CAK23627.1	Muramidase. (247 aa)
	CAK23945.1	Conserved hypothetical protein with transmembrane domains. (315 aa)
	CAK23946.1	Conserved hypothetical protein with transmembrane domains; Missing in other marine cyanobacteria. (378 aa)
	CAK23947.1	Outer membrane efflux protein. (620 aa)
	CAK23969.1	Uncharacterized conserved membrane protein. (159 aa)
	CAK24818.1	Conserved hypothetical protein. (573 aa)

Your Current Organism:

Synechococcus sp. WH 7803

NCBI taxonomy Id: 32051
Other names: S. sp. WH 7803, Synechococcus WH7803, Synechococcus sp. (strain WH7803), Synechococcus sp. WH7803

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAK22735.1	CAK23129.1	SynWH7803_0309	SynWH7803_0703	Uncharacterized conserved secreted protein.	Conserved hypothetical protein.	0.759
CAK22735.1	CAK23153.1	SynWH7803_0309	SynWH7803_0727	Uncharacterized conserved secreted protein.	Uncharacterized conserved membrane protein.	0.710
CAK22735.1	CAK23188.1	SynWH7803_0309	SynWH7803_0762	Uncharacterized conserved secreted protein.	Conserved hypothetical protein.	0.774
CAK22735.1	CAK23553.1	SynWH7803_0309	SynWH7803_1127	Uncharacterized conserved secreted protein.	Uncharacterized conserved secreted protein.	0.773
CAK22735.1	CAK23604.1	SynWH7803_0309	SynWH7803_1178	Uncharacterized conserved secreted protein.	Porin homolog; Belongs to the OprB family.	0.774
CAK22735.1	CAK23627.1	SynWH7803_0309	SynWH7803_1201	Uncharacterized conserved secreted protein.	Muramidase.	0.744
CAK22735.1	CAK23945.1	SynWH7803_0309	SynWH7803_1519	Uncharacterized conserved secreted protein.	Conserved hypothetical protein with transmembrane domains.	0.767
CAK22735.1	CAK23946.1	SynWH7803_0309	SynWH7803_1520	Uncharacterized conserved secreted protein.	Conserved hypothetical protein with transmembrane domains; Missing in other marine cyanobacteria.	0.768
CAK22735.1	CAK23947.1	SynWH7803_0309	SynWH7803_1521	Uncharacterized conserved secreted protein.	Outer membrane efflux protein.	0.651
CAK22735.1	CAK23969.1	SynWH7803_0309	SynWH7803_1543	Uncharacterized conserved secreted protein.	Uncharacterized conserved membrane protein.	0.772
CAK22735.1	CAK24818.1	SynWH7803_0309	SynWH7803_2392	Uncharacterized conserved secreted protein.	Conserved hypothetical protein.	0.773
CAK23129.1	CAK22735.1	SynWH7803_0703	SynWH7803_0309	Conserved hypothetical protein.	Uncharacterized conserved secreted protein.	0.759
CAK23129.1	CAK23153.1	SynWH7803_0703	SynWH7803_0727	Conserved hypothetical protein.	Uncharacterized conserved membrane protein.	0.669
CAK23129.1	CAK23188.1	SynWH7803_0703	SynWH7803_0762	Conserved hypothetical protein.	Conserved hypothetical protein.	0.756
CAK23129.1	CAK23553.1	SynWH7803_0703	SynWH7803_1127	Conserved hypothetical protein.	Uncharacterized conserved secreted protein.	0.662
CAK23129.1	CAK23604.1	SynWH7803_0703	SynWH7803_1178	Conserved hypothetical protein.	Porin homolog; Belongs to the OprB family.	0.763
CAK23129.1	CAK23627.1	SynWH7803_0703	SynWH7803_1201	Conserved hypothetical protein.	Muramidase.	0.737
CAK23129.1	CAK23945.1	SynWH7803_0703	SynWH7803_1519	Conserved hypothetical protein.	Conserved hypothetical protein with transmembrane domains.	0.738
CAK23129.1	CAK23946.1	SynWH7803_0703	SynWH7803_1520	Conserved hypothetical protein.	Conserved hypothetical protein with transmembrane domains; Missing in other marine cyanobacteria.	0.754
CAK23129.1	CAK23947.1	SynWH7803_0703	SynWH7803_1521	Conserved hypothetical protein.	Outer membrane efflux protein.	0.416