Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CYA_0506 | cpcD | CYA_0506 | CYA_0218 | Putative phycobilisome linker polypeptide, phycocyanin-associated, rod; Identified by match to protein family HMM PF01383. | Phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P31966; match to protein family HMM PF01383. | 0.900 |
| apcC | cpcC | CYA_2225 | CYA_2041 | Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. | Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P11398; match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family. | 0.968 |
| apcC | cpcD | CYA_2225 | CYA_0218 | Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. | Phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P31966; match to protein family HMM PF01383. | 0.684 |
| cpcC | apcC | CYA_2041 | CYA_2225 | Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P11398; match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family. | Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. | 0.968 |
| cpcC | cpcD | CYA_2041 | CYA_0218 | Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P11398; match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family. | Phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P31966; match to protein family HMM PF01383. | 0.937 |
| cpcD | CYA_0506 | CYA_0218 | CYA_0506 | Phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P31966; match to protein family HMM PF01383. | Putative phycobilisome linker polypeptide, phycocyanin-associated, rod; Identified by match to protein family HMM PF01383. | 0.900 |
| cpcD | apcC | CYA_0218 | CYA_2225 | Phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P31966; match to protein family HMM PF01383. | Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. | 0.684 |
| cpcD | cpcC | CYA_0218 | CYA_2041 | Phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P31966; match to protein family HMM PF01383. | Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P11398; match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family. | 0.937 |