14 items (Synechococcus sp. JA33Ab) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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Your Input:
	apcB-2	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337. (161 aa)
	cpcA-2	Phycocyanin, alpha subunit; Identified by similarity to SP:P07121; match to protein family HMM PF00502; match to protein family HMM TIGR01338. (160 aa)
	CYA_1851	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family. (899 aa)
	CYA_1814	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family. (898 aa)
	apcB-1	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337. (167 aa)
	CYA_0833	Conserved hypothetical protein; Identified by similarity to GB:BAC09852.1. (159 aa)
	CYA_0524	Putative phycobilisome protein; Identified by match to protein family HMM PF00502. (292 aa)
	CYA_0523	Putative phycobilisome protein. (159 aa)
	cpcB-1	Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339. (172 aa)
	cpcA-1	Phycocyanin, alpha subunit; Identified by similarity to SP:P07121; match to protein family HMM PF00502. (162 aa)
	CYA_2749	Conserved hypothetical protein; Identified by similarity to PIR:S76420. (157 aa)
	apcD	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502. (161 aa)
	apcA	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502. (161 aa)
	cpcB-2	Phycocyanin, beta subunit; Identified by similarity to SP:P07120; match to protein family HMM PF00502. (172 aa)

Your Current Organism:

Synechococcus sp. JA33Ab

NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYA_0523	CYA_0524	CYA_0523	CYA_0524	Putative phycobilisome protein.	Putative phycobilisome protein; Identified by match to protein family HMM PF00502.	0.709
CYA_0523	CYA_1814	CYA_0523	CYA_1814	Putative phycobilisome protein.	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	0.413
CYA_0523	CYA_1851	CYA_0523	CYA_1851	Putative phycobilisome protein.	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	0.413
CYA_0523	apcB-1	CYA_0523	CYA_1337	Putative phycobilisome protein.	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	0.568
CYA_0523	apcB-2	CYA_0523	CYA_2226	Putative phycobilisome protein.	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	0.568
CYA_0523	cpcA-1	CYA_0523	CYA_0220	Putative phycobilisome protein.	Phycocyanin, alpha subunit; Identified by similarity to SP:P07121; match to protein family HMM PF00502.	0.525
CYA_0523	cpcA-2	CYA_0523	CYA_2042	Putative phycobilisome protein.	Phycocyanin, alpha subunit; Identified by similarity to SP:P07121; match to protein family HMM PF00502; match to protein family HMM TIGR01338.	0.525
CYA_0523	cpcB-1	CYA_0523	CYA_0221	Putative phycobilisome protein.	Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339.	0.525
CYA_0523	cpcB-2	CYA_0523	CYA_2043	Putative phycobilisome protein.	Phycocyanin, beta subunit; Identified by similarity to SP:P07120; match to protein family HMM PF00502.	0.525
CYA_0524	CYA_0523	CYA_0524	CYA_0523	Putative phycobilisome protein; Identified by match to protein family HMM PF00502.	Putative phycobilisome protein.	0.709
CYA_1814	CYA_0523	CYA_1814	CYA_0523	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Putative phycobilisome protein.	0.413
CYA_1814	CYA_1851	CYA_1814	CYA_1851	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	0.900
CYA_1814	CYA_2749	CYA_1814	CYA_2749	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Conserved hypothetical protein; Identified by similarity to PIR:S76420.	0.413
CYA_1814	apcA	CYA_1814	CYA_2227	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	0.978
CYA_1814	apcB-1	CYA_1814	CYA_1337	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	0.985
CYA_1814	apcB-2	CYA_1814	CYA_2226	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	0.979
CYA_1814	apcD	CYA_1814	CYA_2790	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	0.787
CYA_1814	cpcA-1	CYA_1814	CYA_0220	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Phycocyanin, alpha subunit; Identified by similarity to SP:P07121; match to protein family HMM PF00502.	0.914
CYA_1814	cpcA-2	CYA_1814	CYA_2042	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Phycocyanin, alpha subunit; Identified by similarity to SP:P07121; match to protein family HMM PF00502; match to protein family HMM TIGR01338.	0.915
CYA_1814	cpcB-1	CYA_1814	CYA_0221	Putative phycobilisome 120 kDa linker polypeptide, core; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339.	0.914

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