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CYB_0011 CYB_0011 CYB_0029 CYB_0029 nrtA nrtA ntrB-1 ntrB-1 ntrC-1 ntrC-1 ntrD ntrD CYB_0144 CYB_0144 CYB_0145 CYB_0145 CYB_0147 CYB_0147 phnC-1 phnC-1 phnD-1 phnD-1 phnE-1 phnE-1 CYB_0181 CYB_0181 CYB_0190 CYB_0190 cysW cysW cysT cysT cysA cysA sbp sbp CYB_0286 CYB_0286 CYB_0309 CYB_0309 CYB_0388 CYB_0388 CYB_0389 CYB_0389 CYB_0390 CYB_0390 CYB_0391 CYB_0391 modB modB modA modA CYB_0505 CYB_0505 CYB_0579 CYB_0579 CYB_0580 CYB_0580 CYB_0581 CYB_0581 CYB_0601 CYB_0601 ntrC-2 ntrC-2 ntrB-2 ntrB-2 CYB_0604 CYB_0604 CYB_0774 CYB_0774 CYB_0775 CYB_0775 CYB_0930 CYB_0930 CYB_0931 CYB_0931 CYB_0932 CYB_0932 CYB_0933 CYB_0933 CYB_0936 CYB_0936 CYB_1048 CYB_1048 pstB-1 pstB-1 pstA-1 pstA-1 pstC-1 pstC-1 pstS-1 pstS-1 mkl mkl CYB_1087 CYB_1087 CYB_1202 CYB_1202 CYB_1234 CYB_1234 potB potB potA potA CYB_1357 CYB_1357 CYB_1454 CYB_1454 phnD-2 phnD-2 phnD phnD phnC-2 phnC-2 phnE-2 phnE-2 phnE-3 phnE-3 CYB_1590 CYB_1590 CYB_1651 CYB_1651 CYB_1689 CYB_1689 CYB_1798 CYB_1798 CYB_1880 CYB_1880 ftsE ftsE CYB_1898 CYB_1898 pstB-2 pstB-2 pstA-2 pstA-2 pstC-2 pstC-2 pstS-2 pstS-2 CYB_2011 CYB_2011 CYB_2012 CYB_2012 CYB_2013 CYB_2013 CYB_2014 CYB_2014 CYB_2015 CYB_2015 CYB_2034 CYB_2034 CYB_2035 CYB_2035 cbiQ cbiQ CYB_2083 CYB_2083 CYB_2084 CYB_2084 potC potC CYB_2302 CYB_2302 CYB_2383 CYB_2383 CYB_2385 CYB_2385 CYB_2460 CYB_2460 ugpB ugpB upgA upgA CYB_2505 CYB_2505 CYB_2551 CYB_2551 CYB_2631 CYB_2631 CYB_2669 CYB_2669 CYB_2671 CYB_2671 pstS-3 pstS-3 CYB_2893 CYB_2893
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
CYB_0011Putative phosphonate ABC transporter, phosphonate-binding protein; Identified by match to protein family HMM TIGR01098. (334 aa)
CYB_0029Quaternary amine ABC transporter (QAT) family, permease protein; Identified by match to protein family HMM PF00528. (213 aa)
nrtANitrate ABC transporter, periplasmic nitrate-binding protein NrtA; Identified by similarity to SP:P38043; match to protein family HMM TIGR01409. (440 aa)
ntrB-1Nitrate ABC transporter, permease protein NrtB; Identified by similarity to SP:P38044; match to protein family HMM PF00528; match to protein family HMM TIGR01183. (319 aa)
ntrC-1Nitrate ABC transporter, ATP-binding protein NtrC; Identified by similarity to SP:P73450; match to protein family HMM PF00005; match to protein family HMM TIGR01184. (663 aa)
ntrDNitrate ABC transporter, ATP-binding protein NtrD; Identified by similarity to SP:P38046; match to protein family HMM PF00005; match to protein family HMM TIGR01184. (280 aa)
CYB_0144Putative zinc ABC transporter, periplasmic zinc-binding protein; Identified by similarity to PDB:1PQ4_A; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. (373 aa)
CYB_0145Manganese/zinc/iron chelate ABC ransporter (MZT) family, ATP-binding protein; Identified by similarity to SP:Q55281; match to protein family HMM PF00005. (266 aa)
CYB_0147Manganese/zinc/iron chelate ABC transporter (MZT) family, permease protein; Identified by match to protein family HMM PF00950. (278 aa)
phnC-1Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (263 aa)
phnD-1Phosphonate ABC tranporter, periplasmic phosphonate-binding protein; Identified by match to protein family HMM TIGR01098. (298 aa)
phnE-1Phosphonate ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01097. (272 aa)
CYB_0181Peroxisomal fatty acyl CoA ABC transporter (P-FAT) family, transmembrane ATP-binding protein; Identified by match to protein family HMM PF00005. (675 aa)
CYB_0190Ferric iron ABC transporter (FeT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. (407 aa)
cysWSulfate ABC transporter, permease protein CysW; Identified by similarity to SP:P27370; match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140. (275 aa)
cysTSulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (270 aa)
cysASulfate ABC transporter, ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (347 aa)
sbpSulfate ABC transporter, periplasmic sulfate-binding protein; Identified by similarity to SP:P06997; match to protein family HMM PF01547; match to protein family HMM TIGR00971. (334 aa)
CYB_0286Membrane protein, putative. (257 aa)
CYB_0309Carbohydrate uptake ABC transporter-2 (CUT2) family, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (354 aa)
CYB_0388Carbohydrate ABC transporter-2 (CUT2) family, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (318 aa)
CYB_0389Carbohydrate ABC transporter-2 (CUT2) family, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (349 aa)
CYB_0390Carbohydrate uptake ABC transporter 2 (CUT2) family, ATP-binding protein; Identified by match to protein family HMM PF00005. (520 aa)
CYB_0391Membrane protein, bmp family; Identified by match to protein family HMM PF02608; match to protein family HMM TIGR01409. (342 aa)
modBMolybdate ABC transporter, permease protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR02141. (595 aa)
modAMolybdate ABC transporter, periplasmic molybdate-binding protein; Identified by match to protein family HMM TIGR01256. (255 aa)
CYB_0505Polyamine transporter, periplasmic polyamine-binding protein; Identified by match to protein family HMM PF01547. (365 aa)
CYB_0579Quaternary amine uptake ABC transporter (QAT) family, periplasmic substrate-binding protein; Identified by match to protein family HMM PF04069. (307 aa)
CYB_0580Quaternary amine uptake ABC transporter (QAT) family, ATP-binding protein; Identified by similarity to SP:P33360; match to protein family HMM PF00005. (322 aa)
CYB_0581Quaternary amine uptake ABC transporter (QAT) family, permease protein; Identified by similarity to GB:AAG43531.1; match to protein family HMM PF00528. (205 aa)
CYB_0601Nitrate ABC transporter, ATP-binding protein NtrD; Identified by similarity to SP:P38046; match to protein family HMM PF00005; match to protein family HMM TIGR01184. (295 aa)
ntrC-2Nitrate ABC transporter, ATP-binding proteins NtrC; Identified by similarity to SP:P38045; match to protein family HMM PF00005; match to protein family HMM TIGR01184. (665 aa)
ntrB-2Nitrate ABC transporter, permease protein; Identified by similarity to GB:AAB86903.1; match to protein family HMM PF00528; match to protein family HMM TIGR01183. (275 aa)
CYB_0604Nitrate/nitrite/cyanate ABC transporter (NitT) family, periplasmic substrate-binding protein; Identified by similarity to SP:P39660; match to protein family HMM TIGR01409. (434 aa)
CYB_0774Hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. (272 aa)
CYB_0775Hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. (235 aa)
CYB_0930Polar amino amino acid ABC transporter (PAAT) family, permease protein; Identified by similarity to SP:Q52814; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (402 aa)
CYB_0931Polar amino amino acid ABC transporter (PAAT) family, permease protein; Identified by similarity to SP:Q52813; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (390 aa)
CYB_0932Polar amino amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein; Identified by similarity to SP:Q52812; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. (345 aa)
CYB_0933Polar amino amino acid ABC transporter (PAAT) family, ATP-binding protein; Identified by similarity to SP:Q52815; match to protein family HMM PF00005. (262 aa)
CYB_0936Hydrophobic amino acid uptake ABC transporter (HAAT) family, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF01094. (471 aa)
CYB_1048Identified by match to protein family HMM PF02632. (206 aa)
pstB-1Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (275 aa)
pstA-1Phosphate ABC transporter, permease protein PtsA; Identified by similarity to SP:P07654; match to protein family HMM PF00528; match to protein family HMM TIGR00974. (296 aa)
pstC-1Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (322 aa)
pstS-1Phosphate ABC transporter, periplasmic phosphate-binding protein; Identified by similarity to SP:P06128; match to protein family HMM PF01547; match to protein family HMM TIGR00975; match to protein family HMM TIGR01409; Belongs to the PstS family. (358 aa)
mklABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (268 aa)
CYB_1087Mce related protein; Identified by match to protein family HMM PF02470. (407 aa)
CYB_1202Hydrophobic amino acid uptake ABC transporter (HAAT) family, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (324 aa)
CYB_1234Heavy metal ABC transporter (HMT) family, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (587 aa)
potBSpermidine/putrescine ABC transporter, permease protein; Identified by similarity to SP:P23860; match to protein family HMM PF00528. (316 aa)
potASpermidine/putrescine ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (384 aa)
CYB_1357Putative membrane protein, YjgP/YjgQ family; Identified by match to protein family HMM PF03739. (370 aa)
CYB_1454Putative transporter; Identified by match to protein family HMM PF02361. (327 aa)
phnD-2Phosphonate ABC transporter, periplasmic phosphonate-binding protein; Identified by match to protein family HMM TIGR01098. (335 aa)
phnDPhosphonate ABC transporter, periplasmic phosphonate-binding protein; Identified by match to protein family HMM TIGR01098. (325 aa)
phnC-2Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (269 aa)
phnE-2Phosphonate ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01097. (269 aa)
phnE-3Phosphonate ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01097. (270 aa)
CYB_1590Carbohydrate uptake ABC transporter-1 (CUT1) family, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (373 aa)
CYB_1651Sugar ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (507 aa)
CYB_1689ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (622 aa)
CYB_1798Putative cobalt ABC transporter (CoT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. (241 aa)
CYB_1880Putative permease; Identified by match to protein family HMM PF02687; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (303 aa)
ftsECell division ATP-binding protein FtsE; Identified by similarity to SP:P10115; match to protein family HMM PF00005; match to protein family HMM TIGR02673. (228 aa)
CYB_1898ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (216 aa)
pstB-2Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (265 aa)
pstA-2Phosphate ABC transporter, permease protein PtsA; Identified by similarity to SP:P07654; match to protein family HMM PF00528; match to protein family HMM TIGR00974. (297 aa)
pstC-2Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (327 aa)
pstS-2Phosphate ABC transporter, phosphate-binding protein; Identified by similarity to SP:P06128; match to protein family HMM PF01547; match to protein family HMM TIGR00975; Belongs to the PstS family. (353 aa)
CYB_2011Urea ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (254 aa)
CYB_2012Urea ABC transporter, ATP-binding protein; Identified by similarity to GB:CAB70951.1; match to protein family HMM PF00005. (255 aa)
CYB_2013Urea ABC transporter, permease protein; Identified by similarity to GB:CAB70950.1; match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (402 aa)
CYB_2014Urea ABC transporter, permease protein; Identified by similarity to GB:CAB70949.1; match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (385 aa)
CYB_2015Urea ABC transporter, periplasmic urea-binding protein; Identified by similarity to GB:CAB70948.1; match to protein family HMM PF01094; match to protein family HMM TIGR01409. (424 aa)
CYB_2034Conserved hypothetical protein. (185 aa)
CYB_2035Putative cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891. (233 aa)
cbiQCobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454. (276 aa)
CYB_2083Hydrophobic amino acid ABC transporter (HAAT) family, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (319 aa)
CYB_2084Hydrophobic amino acid ABC transporter (HAAT) family, permease protein; Identified by similarity to SP:P08340; match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (289 aa)
potCSpermidine/putrescine ABC transporter, permease protein PotC; Identified by similarity to SP:P23859; match to protein family HMM PF00528. (263 aa)
CYB_2302Putative permease, YjgP/YjgQ family; Identified by match to protein family HMM PF03739. (362 aa)
CYB_2383Hydrophobic amino acid uptake transporter (HAAT) ABC transporter family, ATP-binding protein; Identified by match to protein family HMM PF00005. (242 aa)
CYB_2385Putative membrane protein, YjgP/YjgQ family; Identified by match to protein family HMM PF03739. (400 aa)
CYB_2460Identified by match to protein family HMM PF02632. (214 aa)
ugpBGlycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate binding protein; Identified by similarity to SP:P10904; match to protein family HMM PF01547. (450 aa)
upgAGlycerol-3-phosphate ABC transporter, permease protein; Identified by similarity to SP:P10905; match to protein family HMM PF00528. (350 aa)
CYB_2505Putative membrane protein; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; Belongs to the MlaE permease family. (252 aa)
CYB_2551Phosphate uptake transporter (PhoT) ABC transporter family, periplasmic substrate-binding protein. (335 aa)
CYB_2631ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (226 aa)
CYB_2669Ferric iron uptake ABC transporter (FeT) family, periplasmic substrate binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. (348 aa)
CYB_2671Ferric iron uptake ABC transporter (FeT) family, permease protein; Identified by match to protein family HMM PF00528. (566 aa)
pstS-3Phosphate ABC transporter, periplasmic phosphate-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975; Belongs to the PstS family. (366 aa)
CYB_2893Putative sn-glycerol-3-phosphate ABC transporter, permease protein; Identified by similarity to SP:P10906; match to protein family HMM PF00528. (262 aa)
Your Current Organism:
Synechococcus sp. JA23Ba
NCBI taxonomy Id: 321332
Other names: Cyanobacteria bacterium Yellowstone B-Prime, S. sp. JA-2-3B'a(2-13), Synechococcus sp. JA-2-3B'a(2-13)
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