STRINGSTRING
SNOG_12342 SNOG_12342 SNOG_08427 SNOG_08427 SNOG_08324 SNOG_08324 SNOG_02845 SNOG_02845 SNOG_02818 SNOG_02818 SNOG_02186 SNOG_02186
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNOG_12342CoA carboxyltransferase N-terminal domain-containing protein. (475 aa)
SNOG_08427BPL/LPL catalytic domain-containing protein. (622 aa)
SNOG_08324Uncharacterized protein. (631 aa)
SNOG_02845Mannan endo-1,6-alpha-mannosidase. (404 aa)
SNOG_02818Uncharacterized protein. (2246 aa)
SNOG_02186Uncharacterized protein. (1220 aa)
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
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