(6 nodes) Perinuclear endoplasmic reticulum, and Endoplasmic reticulum-plasma membrane tethering network (Parastagonospora nodorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SNOG_09848	Uncharacterized protein. (1418 aa)
	SNOG_06110	PH domain-containing protein. (980 aa)
	SNOG_05006	MSP domain-containing protein. (320 aa)
	SNOG_04843	Uncharacterized protein. (442 aa)
	SNOG_02230	Uncharacterized protein; Belongs to the OSBP family. (1583 aa)
	SNOG_02076	HET domain-containing protein. (1045 aa)

Your Current Organism:

Parastagonospora nodorum

NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SNOG_02076	SNOG_04843	Q0V1N7	Q0UTS1	HET domain-containing protein.	Uncharacterized protein.	0.455
SNOG_02076	SNOG_05006	Q0V1N7	Q0UTA8	HET domain-containing protein.	MSP domain-containing protein.	0.548
SNOG_02076	SNOG_09848	Q0V1N7	Q0UEG6	HET domain-containing protein.	Uncharacterized protein.	0.532
SNOG_02230	SNOG_05006	Q0V183	Q0UTA8	Uncharacterized protein; Belongs to the OSBP family.	MSP domain-containing protein.	0.979
SNOG_04843	SNOG_02076	Q0UTS1	Q0V1N7	Uncharacterized protein.	HET domain-containing protein.	0.455
SNOG_04843	SNOG_05006	Q0UTS1	Q0UTA8	Uncharacterized protein.	MSP domain-containing protein.	0.462
SNOG_04843	SNOG_09848	Q0UTS1	Q0UEG6	Uncharacterized protein.	Uncharacterized protein.	0.449
SNOG_05006	SNOG_02076	Q0UTA8	Q0V1N7	MSP domain-containing protein.	HET domain-containing protein.	0.548
SNOG_05006	SNOG_02230	Q0UTA8	Q0V183	MSP domain-containing protein.	Uncharacterized protein; Belongs to the OSBP family.	0.979
SNOG_05006	SNOG_04843	Q0UTA8	Q0UTS1	MSP domain-containing protein.	Uncharacterized protein.	0.462
SNOG_05006	SNOG_06110	Q0UTA8	Q0UQ54	MSP domain-containing protein.	PH domain-containing protein.	0.961
SNOG_05006	SNOG_09848	Q0UTA8	Q0UEG6	MSP domain-containing protein.	Uncharacterized protein.	0.555
SNOG_06110	SNOG_05006	Q0UQ54	Q0UTA8	PH domain-containing protein.	MSP domain-containing protein.	0.961
SNOG_06110	SNOG_09848	Q0UQ54	Q0UEG6	PH domain-containing protein.	Uncharacterized protein.	0.542
SNOG_09848	SNOG_02076	Q0UEG6	Q0V1N7	Uncharacterized protein.	HET domain-containing protein.	0.532
SNOG_09848	SNOG_04843	Q0UEG6	Q0UTS1	Uncharacterized protein.	Uncharacterized protein.	0.449
SNOG_09848	SNOG_05006	Q0UEG6	Q0UTA8	Uncharacterized protein.	MSP domain-containing protein.	0.555
SNOG_09848	SNOG_06110	Q0UEG6	Q0UQ54	Uncharacterized protein.	PH domain-containing protein.	0.542