(24 nodes) Mixed, incl. Prp19 complex, and Generation of catalytic spliceosome for second transesterification step network (Parastagonospora nodorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SNOG_16410	Uncharacterized protein. (332 aa)
	SNOG_15981	WD_REPEATS_REGION domain-containing protein. (503 aa)
	SNOG_15008	WD_REPEATS_REGION domain-containing protein. (457 aa)
	SNOG_14113	DUF1716 domain-containing protein. (609 aa)
	SNOG_13797	Uncharacterized protein. (237 aa)
	SNOG_12293	Uncharacterized protein. (240 aa)
	SNOG_11874	SKIP_SNW domain-containing protein. (557 aa)
	SNOG_10893	Uncharacterized protein. (287 aa)
	SNOG_09372	Uncharacterized protein. (141 aa)
	SNOG_08990	Uncharacterized protein. (492 aa)
	SNOG_08930	Uncharacterized protein. (853 aa)
	SNOG_08770	Uncharacterized protein. (674 aa)
	SNOG_08693	Uncharacterized protein. (1217 aa)
	SNOG_08444	RRM domain-containing protein. (375 aa)
	SNOG_08251	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1468 aa)
	SNOG_07410	RRM domain-containing protein. (155 aa)
	SNOG_07203	Isochorismatase domain-containing protein. (298 aa)
	SNOG_07183	Cir_N domain-containing protein. (350 aa)
	SNOG_07181	Uncharacterized protein. (285 aa)
	SNOG_06985	Uncharacterized protein. (680 aa)
	SNOG_04637	Uncharacterized protein. (980 aa)
	SNOG_01905	Uncharacterized protein. (362 aa)
	SNOG_01720	Uncharacterized protein. (181 aa)
	SNOG_01575	Cwf21 domain-containing protein. (183 aa)

Your Current Organism:

Parastagonospora nodorum

NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SNOG_01575	SNOG_01720	Q0V339	Q0V2P4	Cwf21 domain-containing protein.	Uncharacterized protein.	0.420
SNOG_01575	SNOG_01905	Q0V339	Q0V259	Cwf21 domain-containing protein.	Uncharacterized protein.	0.667
SNOG_01575	SNOG_04637	Q0V339	Q0UUC7	Cwf21 domain-containing protein.	Uncharacterized protein.	0.983
SNOG_01575	SNOG_06985	Q0V339	Q0UMM9	Cwf21 domain-containing protein.	Uncharacterized protein.	0.930
SNOG_01575	SNOG_07181	Q0V339	Q0UM33	Cwf21 domain-containing protein.	Uncharacterized protein.	0.977
SNOG_01575	SNOG_07183	Q0V339	Q0UM31	Cwf21 domain-containing protein.	Cir_N domain-containing protein.	0.973
SNOG_01575	SNOG_07203	Q0V339	Q0UM11	Cwf21 domain-containing protein.	Isochorismatase domain-containing protein.	0.913
SNOG_01575	SNOG_07410	Q0V339	Q0ULF4	Cwf21 domain-containing protein.	RRM domain-containing protein.	0.513
SNOG_01575	SNOG_08251	Q0V339	Q0UJ13	Cwf21 domain-containing protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.677
SNOG_01575	SNOG_08444	Q0V339	Q0UIH0	Cwf21 domain-containing protein.	RRM domain-containing protein.	0.908
SNOG_01575	SNOG_08693	Q0V339	Q0UHS1	Cwf21 domain-containing protein.	Uncharacterized protein.	0.904
SNOG_01575	SNOG_08770	Q0V339	Q0UHJ4	Cwf21 domain-containing protein.	Uncharacterized protein.	0.904
SNOG_01575	SNOG_08930	Q0V339	Q0UH34	Cwf21 domain-containing protein.	Uncharacterized protein.	0.919
SNOG_01575	SNOG_08990	Q0V339	Q0UGX4	Cwf21 domain-containing protein.	Uncharacterized protein.	0.990
SNOG_01575	SNOG_09372	Q0V339	Q0UFU2	Cwf21 domain-containing protein.	Uncharacterized protein.	0.991
SNOG_01575	SNOG_10893	Q0V339	Q0UBH1	Cwf21 domain-containing protein.	Uncharacterized protein.	0.969
SNOG_01575	SNOG_11874	Q0V339	Q0U8P0	Cwf21 domain-containing protein.	SKIP_SNW domain-containing protein.	0.947
SNOG_01575	SNOG_13797	Q0V339	Q0U367	Cwf21 domain-containing protein.	Uncharacterized protein.	0.943
SNOG_01575	SNOG_15008	Q0V339	Q0TZJ3	Cwf21 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.948
SNOG_01575	SNOG_15981	Q0V339	Q0TWQ1	Cwf21 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.988