STRINGSTRING
SNOG_15321 SNOG_15321 SNOG_13659 SNOG_13659 SNOG_06931 SNOG_06931 SNOG_05550 SNOG_05550 SNOG_04709 SNOG_04709 SNOG_03588 SNOG_03588
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNOG_15321Uncharacterized protein. (578 aa)
SNOG_13659AAA domain-containing protein. (772 aa)
SNOG_06931Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (727 aa)
SNOG_05550Uncharacterized protein. (254 aa)
SNOG_04709ORC_WH_C domain-containing protein. (634 aa)
SNOG_03588Cell division control protein; Belongs to the CDC6/cdc18 family. (641 aa)
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
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