(13 nodes) Mixed, incl. Regulation of cell septum assembly, and Rap1 signalling network (Parastagonospora nodorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SNOG_15884	Uncharacterized protein. (1810 aa)
	SNOG_11351	Protein kinase domain-containing protein. (1078 aa)
	SNOG_10337	Uncharacterized protein. (360 aa)
	SNOG_10294	Uncharacterized protein. (291 aa)
	SNOG_08380	Uncharacterized protein. (354 aa)
	SNOG_07420	Non-specific serine/threonine protein kinase. (654 aa)
	SNOG_07280	Uncharacterized protein. (388 aa)
	SNOG_07080	Uncharacterized protein. (1631 aa)
	SNOG_05171	Protein kinase domain-containing protein. (1499 aa)
	SNOG_04676	Rab-GAP TBC domain-containing protein. (323 aa)
	SNOG_04442	Uncharacterized protein. (552 aa)
	SNOG_02204	Uncharacterized protein. (1010 aa)
	SNOG_01825	Uncharacterized protein. (902 aa)

Your Current Organism:

Parastagonospora nodorum

NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SNOG_01825	SNOG_04676	Q0V2D9	Q0UU88	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.902
SNOG_01825	SNOG_05171	Q0V2D9	Q0USU3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.557
SNOG_01825	SNOG_07080	Q0V2D9	Q0UMD4	Uncharacterized protein.	Uncharacterized protein.	0.712
SNOG_01825	SNOG_07280	Q0V2D9	Q0ULT3	Uncharacterized protein.	Uncharacterized protein.	0.509
SNOG_01825	SNOG_10337	Q0V2D9	Q0UD27	Uncharacterized protein.	Uncharacterized protein.	0.801
SNOG_02204	SNOG_04442	Q0V1B0	Q0UUX2	Uncharacterized protein.	Uncharacterized protein.	0.678
SNOG_02204	SNOG_04676	Q0V1B0	Q0UU88	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.930
SNOG_02204	SNOG_05171	Q0V1B0	Q0USU3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.480
SNOG_02204	SNOG_07080	Q0V1B0	Q0UMD4	Uncharacterized protein.	Uncharacterized protein.	0.422
SNOG_02204	SNOG_07280	Q0V1B0	Q0ULT3	Uncharacterized protein.	Uncharacterized protein.	0.457
SNOG_02204	SNOG_08380	Q0V1B0	Q0UIN4	Uncharacterized protein.	Uncharacterized protein.	0.570
SNOG_02204	SNOG_10337	Q0V1B0	Q0UD27	Uncharacterized protein.	Uncharacterized protein.	0.906
SNOG_02204	SNOG_11351	Q0V1B0	Q0UA63	Uncharacterized protein.	Protein kinase domain-containing protein.	0.637
SNOG_02204	SNOG_15884	Q0V1B0	Q0TX72	Uncharacterized protein.	Uncharacterized protein.	0.626
SNOG_04442	SNOG_02204	Q0UUX2	Q0V1B0	Uncharacterized protein.	Uncharacterized protein.	0.678
SNOG_04442	SNOG_08380	Q0UUX2	Q0UIN4	Uncharacterized protein.	Uncharacterized protein.	0.415
SNOG_04676	SNOG_01825	Q0UU88	Q0V2D9	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.902
SNOG_04676	SNOG_02204	Q0UU88	Q0V1B0	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.930
SNOG_04676	SNOG_05171	Q0UU88	Q0USU3	Rab-GAP TBC domain-containing protein.	Protein kinase domain-containing protein.	0.992
SNOG_04676	SNOG_07080	Q0UU88	Q0UMD4	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.881