(13 nodes) Organellar small ribosomal subunit network (Parastagonospora nodorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SNOG_14990	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (416 aa)
	SNOG_12043	Uncharacterized protein. (357 aa)
	SNOG_09023	Ribosomal_S10 domain-containing protein. (267 aa)
	SNOG_08915	Uncharacterized protein. (46 aa)
	SNOG_07495	L51_S25_CI-B8 domain-containing protein. (202 aa)
	SNOG_06913	Uncharacterized protein. (219 aa)
	SNOG_06618	MRP-S28 domain-containing protein. (409 aa)
	SNOG_06564	Ribosomal_S7 domain-containing protein. (340 aa)
	SNOG_05718	Uncharacterized protein. (332 aa)
	SNOG_03698	Uncharacterized protein. (471 aa)
	SNOG_03199	Uncharacterized protein. (148 aa)
	SNOG_02842	Uncharacterized protein. (128 aa)
	SNOG_00177	Uncharacterized protein. (113 aa)

Your Current Organism:

Parastagonospora nodorum

NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SNOG_00177	SNOG_02842	Q0V737	Q0UZH2	Uncharacterized protein.	Uncharacterized protein.	0.999
SNOG_00177	SNOG_03199	Q0V737	Q0UYG5	Uncharacterized protein.	Uncharacterized protein.	0.998
SNOG_00177	SNOG_03698	Q0V737	Q0UX16	Uncharacterized protein.	Uncharacterized protein.	0.999
SNOG_00177	SNOG_05718	Q0V737	Q0UR96	Uncharacterized protein.	Uncharacterized protein.	0.999
SNOG_00177	SNOG_06564	Q0V737	Q0UNV0	Uncharacterized protein.	Ribosomal_S7 domain-containing protein.	0.999
SNOG_00177	SNOG_06618	Q0V737	Q0UNP6	Uncharacterized protein.	MRP-S28 domain-containing protein.	0.999
SNOG_00177	SNOG_06913	Q0V737	Q0UMV1	Uncharacterized protein.	Uncharacterized protein.	0.999
SNOG_00177	SNOG_07495	Q0V737	Q0UL69	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.998
SNOG_00177	SNOG_08915	Q0V737	Q0UH49	Uncharacterized protein.	Uncharacterized protein.	0.999
SNOG_00177	SNOG_09023	Q0V737	Q0UGU1	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.999
SNOG_00177	SNOG_12043	Q0V737	Q0U871	Uncharacterized protein.	Uncharacterized protein.	0.999
SNOG_00177	SNOG_14990	Q0V737	Q0TZI0	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
SNOG_02842	SNOG_00177	Q0UZH2	Q0V737	Uncharacterized protein.	Uncharacterized protein.	0.999
SNOG_02842	SNOG_03199	Q0UZH2	Q0UYG5	Uncharacterized protein.	Uncharacterized protein.	0.998
SNOG_02842	SNOG_03698	Q0UZH2	Q0UX16	Uncharacterized protein.	Uncharacterized protein.	0.999
SNOG_02842	SNOG_05718	Q0UZH2	Q0UR96	Uncharacterized protein.	Uncharacterized protein.	0.999
SNOG_02842	SNOG_06564	Q0UZH2	Q0UNV0	Uncharacterized protein.	Ribosomal_S7 domain-containing protein.	0.999
SNOG_02842	SNOG_06618	Q0UZH2	Q0UNP6	Uncharacterized protein.	MRP-S28 domain-containing protein.	0.999
SNOG_02842	SNOG_06913	Q0UZH2	Q0UMV1	Uncharacterized protein.	Uncharacterized protein.	0.999
SNOG_02842	SNOG_07495	Q0UZH2	Q0UL69	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.999