STRINGSTRING
SNOG_00883 SNOG_00883 SNOG_11749 SNOG_11749 SNOG_11041 SNOG_11041 SEC16 SEC16 SNOG_10633 SNOG_10633 SAR1 SAR1 SNOG_07627 SNOG_07627 SEC31 SEC31 SNOG_07217 SNOG_07217 SEC13 SEC13 SNOG_06261 SNOG_06261 SNOG_06025 SNOG_06025 SEC23 SEC23 VMA21 VMA21 SNOG_03506 SNOG_03506 SNOG_03278 SNOG_03278 SNOG_03170 SNOG_03170 SNOG_02935 SNOG_02935 SNOG_01633 SNOG_01633
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNOG_00883Uncharacterized protein. (776 aa)
SNOG_11749AP-1 complex subunit gamma. (830 aa)
SNOG_11041MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (445 aa)
SEC16COPII coat assembly protein SEC16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy (By similarity); Belongs to the SEC16 family. (1776 aa)
SNOG_10633AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (153 aa)
SAR1Small COPII coat GTPase SAR1; Small GTPase component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. SAR1 controls the coat assembly in a stepwise manner. Activated SAR1-GTP binds to membranes first and recruits the SEC23/24 complex. These SEC23/24-SAR1 prebudding intermediates are then collected by the SEC13/31 complex as subunits polymerize to form coated trans [...] (185 aa)
SNOG_07627t-SNARE coiled-coil homology domain-containing protein. (225 aa)
SEC31Protein transport protein SEC31; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity). (1256 aa)
SNOG_07217Uncharacterized protein. (701 aa)
SEC13Protein transport protein SEC13; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport facto [...] (302 aa)
SNOG_06261Uncharacterized protein. (967 aa)
SNOG_06025Uncharacterized protein. (182 aa)
SEC23Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity). (776 aa)
VMA21Vacuolar ATPase assembly integral membrane protein VMA21; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family. (110 aa)
SNOG_03506Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1589 aa)
SNOG_03278Uncharacterized protein. (1001 aa)
SNOG_03170Uncharacterized protein. (844 aa)
SNOG_02935Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (253 aa)
SNOG_01633Uncharacterized protein; Belongs to the synaptobrevin family. (222 aa)
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
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