STRINGSTRING
SNOG_14242 SNOG_14242 SNOG_06922 SNOG_06922 SNOG_04405 SNOG_04405 SNOG_01416 SNOG_01416 SNOG_10369 SNOG_10369
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNOG_14242Uncharacterized protein. (161 aa)
SNOG_06922E3 ubiquitin-protein ligase PEP5. (991 aa)
SNOG_04405Vta1 domain-containing protein; Belongs to the STXBP/unc-18/SEC1 family. (1010 aa)
SNOG_01416Uncharacterized protein. (151 aa)
SNOG_10369Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (843 aa)
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.