(10 nodes) Phosphorylation of RNA polymerase II C-terminal domain network (Parastagonospora nodorum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SNOG_06960	Uncharacterized protein. (312 aa)
	SNOG_14345	BSD domain-containing protein. (628 aa)
	SNOG_11254	Uncharacterized protein. (261 aa)
	SNOG_11253	Uncharacterized protein. (338 aa)
	SNOG_11252	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (389 aa)
	SNOG_09475	Helicase ATP-binding domain-containing protein. (724 aa)
	SNOG_09406	Protein kinase domain-containing protein. (568 aa)
	SNOG_09074	Uncharacterized protein. (416 aa)
	SNOG_08115	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (426 aa)
	SNOG_03503	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (409 aa)

Your Current Organism:

Parastagonospora nodorum

NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SNOG_03503	SNOG_06960	Q0UXL1	Q0UMQ4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.998
SNOG_03503	SNOG_08115	Q0UXL1	Q0UJE9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.973
SNOG_03503	SNOG_09074	Q0UXL1	Q0UGP0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.999
SNOG_03503	SNOG_09406	Q0UXL1	Q0UFQ8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.827
SNOG_03503	SNOG_09475	Q0UXL1	Q0UFI9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Helicase ATP-binding domain-containing protein.	0.993
SNOG_03503	SNOG_11252	Q0UXL1	Q0UAG2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.818
SNOG_03503	SNOG_11253	Q0UXL1	Q0UAG1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.568
SNOG_03503	SNOG_11254	Q0UXL1	Q0UAG0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.568
SNOG_03503	SNOG_14345	Q0UXL1	Q0U1G8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	BSD domain-containing protein.	0.986
SNOG_06960	SNOG_03503	Q0UMQ4	Q0UXL1	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.998
SNOG_06960	SNOG_08115	Q0UMQ4	Q0UJE9	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
SNOG_06960	SNOG_09074	Q0UMQ4	Q0UGP0	Uncharacterized protein.	Uncharacterized protein.	0.999
SNOG_06960	SNOG_09406	Q0UMQ4	Q0UFQ8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.739
SNOG_06960	SNOG_09475	Q0UMQ4	Q0UFI9	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.999
SNOG_06960	SNOG_11252	Q0UMQ4	Q0UAG2	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.739
SNOG_06960	SNOG_14345	Q0UMQ4	Q0U1G8	Uncharacterized protein.	BSD domain-containing protein.	0.999
SNOG_08115	SNOG_03503	Q0UJE9	Q0UXL1	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.973
SNOG_08115	SNOG_06960	Q0UJE9	Q0UMQ4	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Uncharacterized protein.	0.999
SNOG_08115	SNOG_09074	Q0UJE9	Q0UGP0	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Uncharacterized protein.	0.993
SNOG_08115	SNOG_09406	Q0UJE9	Q0UFQ8	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Protein kinase domain-containing protein.	0.725