STRINGSTRING
SNOG_04685 SNOG_04685 SNOG_13026 SNOG_13026 SNOG_11044 SNOG_11044 SNOG_03622 SNOG_03622
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNOG_04685Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (885 aa)
SNOG_13026PA14 domain-containing protein. (870 aa)
SNOG_11044PA14 domain-containing protein. (246 aa)
SNOG_03622Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (804 aa)
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
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