STRINGSTRING
SNOG_01494 SNOG_01494 SNOG_09178 SNOG_09178 SNOG_07900 SNOG_07900 SNOG_02853 SNOG_02853 SNOG_13239 SNOG_13239 SNOG_15635 SNOG_15635
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNOG_01494AMPK1_CBM domain-containing protein. (735 aa)
SNOG_09178AMPKBI domain-containing protein. (563 aa)
SNOG_07900Uncharacterized protein. (318 aa)
SNOG_02853Uncharacterized protein. (63 aa)
SNOG_13239Uncharacterized protein. (170 aa)
SNOG_15635Uncharacterized protein. (321 aa)
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
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